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In a study of the role that voltage-dependent K+ channels may have in the mechanosensation of living cells (Schmidt et al. Proc Soc Natl Acad Sci USA 109: 10352-10357. 2012), the data were as conventionally done fitted by a Boltzmann…

Biological Physics · Physics 2016-06-10 Per Nissen

A wide variety of biological as well as non-biological processes and phenomena involving ion channels, binding, pH, folding/unfolding and effects of chain length are well represented by multiphasic profiles, a series of straight lines…

Biological Physics · Physics 2015-12-08 Per Nissen

In agreement with previous findings (Nissen 2017a,b), data (Wilczek-Vera et al. 2004) for the ion activities of a variety of simple inorganic compounds are shown to be precisely represented as multiphasic, i.e. as a series of straight lines…

Biological Physics · Physics 2018-07-20 Per Nissen , Bob Eisenberg

In a structural analysis of the proteasome activator PafE in Mycobacterium tuberculosis, the binding of the activator or shorter constructs to the 20S proteasome core particle (20S CP) or derivatives was measured by isothermal titration…

Biological Physics · Physics 2016-06-30 Per Nissen

When plotted in linear transformations of the Michaelis-Menten equation, ion uptake in plants has been shown to be multiphasic, i.e. to be represented by a series of straight lines separated by discontinuous transitions (Nissen 1971, 1974,…

Biological Physics · Physics 2017-12-06 Per Nissen

Reanalysis of data (Bruice and York 1961) for the pH dependences of the calculated apparent second-order rate constants (k2) for the reaction of tris-(hydroxymethyl)-aminomethane (TRIS) with phenyl esters reveals that the pH profiles are…

Chemical Physics · Physics 2015-12-09 Per Nissen

The preceding paper (Nissen 2017) shows multiphasic profiles, straight lines separated by discontinuous transitions, for the ion activities of NaCl and KCl at 15, 25, 35 and 45oC based on very precise tabular data of Lee et al. (2002). In…

Biological Physics · Physics 2017-12-20 Per Nissen

Excitability is an attribute of life, and is a driving force in the descent of complexity. Cellular electrical activity as realized by membrane proteins that act as either channels or transporters is the basis of excitability. Electrical…

Biomolecules · Quantitative Biology 2009-11-05 Ashok Palaniappan , Eric Jakobsson

Potassium (K$^+$) channels regulate the flux of K$^+$ ions through cell membranes and plays significant roles in many physiological functions. This work studies the KcsA potassium channel, including the selectivity and current-voltage (IV)…

Biological Physics · Physics 2019-08-14 Zilong Song , Xiulei Cao , Tzyy-Leng Horng , Huaxiong Huang

Membrane proteins constitute a large portion of the human proteome and perform a variety of important functions as membrane receptors, transport proteins, enzymes, signaling proteins, and more. The computational studies of membrane proteins…

Biological Physics · Physics 2017-04-25 Li Xiao , Jianxiong Diao , D Artagnan Greene , Junmei Wang , Ray Luo

We present high signal-to-noise ratio, multi-frequency polarization pulse profiles for 24 millisecond pulsars that are being observed as part of the Parkes Pulsar Timing Array (PPTA) project. The pulsars are observed in three bands, centred…

Synthetic lipid membranes can display channel-like ion conduction events even in the absence of proteins. We show here that these events are voltage-gated with a quadratic voltage dependence as expected from electrostatic theory of…

Biological Physics · Physics 2015-06-11 Andreas Blicher , Thomas Heimburg

We study the effect of intracellular ion diffusion on ionic currents permeating through the cell membrane. Ion flux across the cell membrane is mediated by special proteins forming specific channels. The structure of potassium channels have…

Cell Behavior · Quantitative Biology 2015-02-20 D. Andreucci , D. Bellaveglia , E. N. M. Cirillo , S. Marconi

The nucleotides guanosine tetraphosphate (ppGpp) and guanosine pentaphosphate (pppGpp) bind to target proteins to promote bacterial survival (Corrigan et al. 2016). Thus, the binding of the nucleotides to RsgA, a GTPase, inhibits the…

Biological Physics · Physics 2016-08-29 Per Nissen

With an increasing high penetration of solar photovoltaic generation in electric power grids, voltage phasors and branch power flows experience more severe fluctuations. In this context, probabilistic power flow (PPF) study aims at…

Systems and Control · Electrical Eng. & Systems 2022-05-03 Kejun Chen , Yu Zhang

The Butler-Volmer (BV) equation links the current flux crossing an electrochemical interface to the electric potential drop across it with the assumption of Arrhenius kinetics and the Boltzmann factor. Applying the semilogarithmic Tafel…

Applied Physics · Physics 2022-01-11 Anis Allagui , Hachemi Benaoum , Chunlei Wang

The Boltzmann equation models gas dynamics in the low density or high Mach number regime, using a statistical description of molecular interactions. Planar shock wave solutions have been constructed for the Boltzmann equation for hard…

Analysis of PDEs · Mathematics 2024-11-05 Dominic Wynter

The electrophysiology of betacells is at the origin of insulin secretion. Betacells exhibit a complex behaviour upon stimulation with glucose including repeated and uninterrupted bursting. Mathematical modelling is most suitable to improve…

Cell Behavior · Quantitative Biology 2007-05-23 Michael Meyer-Hermann

The electro-osmotic flow through a channel between two undulated surfaces induced by an external electric field is investigated. The gap of the channel is very small and comparable to the thickness of the electrical double layers. A lattice…

Soft Condensed Matter · Physics 2016-05-24 Hiroaki Yoshida , Tomoyuki Kinjo , Hitoshi Washizu

Polarisation of radio pulsar profiles involves a number of poorly understood, intriguing phenomena, such as the existence of comparable amounts of orthogonal polarisation modes (OPMs), strong distortions of polarisation angle (PA) curves…

High Energy Astrophysical Phenomena · Physics 2017-05-26 J. Dyks
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