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Cell deformability is an essential determinant for tissue-scale mechanical nature, such as fluidity and rigidity, and is thus crucial for understanding tissue homeostasis and stable developmental processes. However, numerical simulations…

Tissues and Organs · Quantitative Biology 2023-03-08 Nen Saito , Shuji Ishihara

Microtubules (MTs) are self-assembled hollow protein tubes playing important functions in live cells. Their building block is a protein called tubulin, which self-assembles in a particulate 2 dimensional lattice. We study the vibrational…

Soft Condensed Matter · Physics 2009-12-07 Emil Prodan , Camelia Prodan

The vertex model is widely used to describe the dynamics of epithelial tissues, because of its simplicity and versatility and the direct inclusion of biophysical parameters. Here, it is shown that quite generally, when cells modify their…

Soft Condensed Matter · Physics 2020-11-25 Fernanda Perez-Verdugo , Jean-Francois Joanny , Rodrigo Soto

The phase diagram of binary mixtures of particles interacting via a pair potential of parallel dipoles is computed at zero temperature as a function of composition and the ratio of their magnetic susceptibilities. Using lattice sums, a rich…

Soft Condensed Matter · Physics 2009-11-13 Lahcen Assoud , René Messina , Hartmut Löwen

Development of topological insulating phases in IV-VI compounds under dynamic lattice deformations is studied using first-principles methods. Unlike the static state of topological phases at equilibrium conditions, we show that non-trivial…

Materials Science · Physics 2015-09-30 Jinwoong Kim , Seung-Hoon Jhi

Hubbard-type models on the hexagonal lattice are of great interest, as they provide realistic descriptions of graphene and other related materials. Hybrid Monte Carlo simulations offer a first-principles approach to study their phase…

Strongly Correlated Electrons · Physics 2021-06-22 Dominik Smith , Pavel Buividovich , Michael Körner , Maksim Ulybyshev , Lorenz von Smekal

Thermodynamic and electronic properties are obtained for a lattice-gas model fluid with self-consistent, partial, occupation of its sites; the self consistency consists in obtaining ionic configurations from grand-canonical Monte Carlo…

Statistical Mechanics · Physics 2009-10-30 M. Reinaldo-Falagan , P. Tarazona , E. Chacon , J. P. Hernandez

In liquid crystals, if flexoelectric couplings between polar order and director gradients are strong enough, the uniform nematic phase can become unstable to formation of a modulated polar phase. Previous theories have predicted two types…

Soft Condensed Matter · Physics 2018-06-21 Shaikh M. Shamid , David W. Allender , Jonathan V. Selinger

The Bi12.5Nd1.5ReO24.5 tetragonal phase has been synthesized and lattice cell parameters have been determined. According to X-ray data the phase has I4/m sym-metry with lattice parameters a = 0.86742 (12) nm, c =1.7408 (3) nm.

Materials Science · Physics 2015-11-30 N. I. Matskevich , Th. Wolf , P. Adelmann , O. I. Ahyfrieva , M. Yu. Matskevich

We use the classical version of the density-functional theory in the weighted-density approximation to build up the entire phase diagram and the interface structure of a two-dimensional lattice-gas model which is known, from previous…

Statistical Mechanics · Physics 2011-10-25 S. Prestipino , P. V. Giaquinta

It is shown that a quasi two dimensional (layered) Heisenberg antiferromagnet with fully frustrated interplane couplings ({\it e.g.} on a body-centered tetragonal lattice) generically exhibits two thermal phase transitions with lowering…

Strongly Correlated Electrons · Physics 2009-11-11 Fang Chen , Jiangping Hu , Steven Kivelson , Stuart Brown

Dielectric tensor and lattice dynamics of alpha-PbO2-type TiO2 have been investigated using the density functional perturbation theory, with a focus on responses of the vibrational frequencies to pressure. The calculated Raman spectra under…

Materials Science · Physics 2011-09-27 Yongqing Cai , Chun Zhang , Yuan Ping Feng

Nb-Ru is a high temperature shape memory alloy that undergoes a Martensitic transformation from a parent cubic b-phase into a tetragonal b' phase at TM 900 C. Measurements of the phonon dispersion curves show that the [110]-TA2 phonon…

Materials Science · Physics 2009-11-11 S. M. Shapiro , G. Xu , G. Gu , J. Gardner , R. W. Fonda

There have existed for a long time a paradigm that TiO phases at ambient conditions are stable only if structural vacancies are available. Using an evolutionary algorithm, we perform an ab initio search of possible zero-temperature…

Chemical Physics · Physics 2020-03-18 N. M. Chtchelkatchev , R. E. Ryltsev , M. V. Magnitskaya , Andrey A. Rempel

We present a Raman scattering study of Ca$_2$RuO$_4$, in which we investigate the temperature-dependence of the lattice dynamics and the electron-phonon interaction below the metal-insulator transition temperature ({\it T}$_{\rm MI}$).…

Strongly Correlated Electrons · Physics 2009-11-11 H. Rho , S. L. Cooper , S. Nakatsuji , H. Fukazawa , Y. Maeno

A q-deformed two-dimensional phase space is studied as a model for a noncommutative phase space. A lattice structure arises that can be interpreted as a spontaneous breaking of a continuous symmetry. The eigenfunctions of a Hamiltonian that…

High Energy Physics - Theory · Physics 2010-11-19 M. Fichtmueller , A. Lorek , J. Wess

We have explored the unknown structure of the phosphorus in the phase IV (P-IV phase) based on the first-principles calculations using the metadynamics simulation method. Starting from the simple cubic structure, we found a new modulated…

Materials Science · Physics 2009-11-11 T. Ishikawa , H. Nagara , K. Kusakabe , N. Suzuki

We present a first-principles investigation of structural and elastic properties of experimentally observed phases of bulk SrRuO$_3$ - namely orthorhombic, tetragonal, and cubic - by applying density functional theory (DFT) approximations.…

Materials Science · Physics 2016-10-11 Š. Masys , V. Jonauskas

We introduce a class of $n$-dimensional (possibly inhomogeneous) spin-like lattice systems presenting modulated phases with possibly different textures. Such systems can be parameterized according to the number of ground states, and can be…

Statistical Mechanics · Physics 2021-06-11 Andrea Braides , Marco Cicalese

The structural properties of the SrFe2As2 and CaFe2As2 compounds have been extensively analyzed by transmission electron microscopy (TEM) from room temperature down to 20K. The experimental results demonstrate that the SrFe2As2 crystal, in…

Superconductivity · Physics 2013-05-29 C. Ma , H. X. Yang , H. F. Tian , H. L Shi , J. B. Lu , Z. W. Wang , L. J. Zeng , G. F. Chen , N. L. Wang , J. Q. Li