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A pervasive challenge in neuroscience is testing whether neuronal connectivity changes over time due to specific causes, such as stimuli, events, or clinical interventions. Recent hardware innovations and falling data storage costs enable…

Neurons and Cognition · Quantitative Biology 2024-01-05 Johan Medrano , Karl J. Friston , Peter Zeidman

Human motion prediction is a stochastic process: Given an observed sequence of poses, multiple future motions are plausible. Existing approaches to modeling this stochasticity typically combine a random noise vector with information about…

This paper investigates the conditions for the formation of local bumps in the activity of binary attractor neural networks with spatially dependent connectivity. We show that these formations are observed when asymmetry between the…

Disordered Systems and Neural Networks · Physics 2009-11-11 Kostadin Koroutchev , Elka Korutcheva

A continuous-time dynamical system with parameter $\varepsilon$ is nearly-periodic if all its trajectories are periodic with nowhere-vanishing angular frequency as $\varepsilon$ approaches 0. Nearly-periodic maps are discrete-time analogues…

Machine Learning · Computer Science 2023-05-11 Valentin Duruisseaux , Joshua W. Burby , Qi Tang

The long time dynamics of large particles trapped in two inhomogeneous turbulent shear flows is studied experimentally. Both flows present a common feature, a shear region that separates two colliding circulations, but with different…

Fluid Dynamics · Physics 2016-03-02 N Machicoane , M López-Caballero , L Fiabane , J-F Pinton , M Bourgoin , J Burguete , R Volk

Stochastic dynamical systems with slow or metastable behavior evolve, on long time scales, on an unknown low-dimensional manifold in high-dimensional ambient space. Building a reduced simulator from short-burst ambient ensembles is a…

Machine Learning · Computer Science 2026-04-20 Sean Hill , Felix X. -F. Ye

Correct prediction of particle transport by surface waves is crucial in many practical applications such as search and rescue or salvage operations and pollution tracking and clean-up efforts. Recent results have indicated transport by…

Fluid Dynamics · Physics 2023-01-26 D. Eeltink , R. Calvert , J. E. Swagemakers , Qian Xiao , T. S. van den Bremer

Stochastic averaging allows for the reduction of the dimension and complexity of stochastic dynamical systems with multiple time scales, replacing fast variables with statistically equivalent stochastic processes in order to analyze…

Probability · Mathematics 2015-02-25 William F. Thompson , Rachel A. Kuske , Adam H. Monahan

We propose a hierarchically modular, dynamical neural network model whose architecture minimizes a specifically designed energy function and defines its temporal characteristics. The model has an internal and an external space that are…

Neurons and Cognition · Quantitative Biology 2026-04-16 Kazuyoshi Tsutsumi , Ernst Niebur

This paper introduces a new probabilistic framework for supervised learning in neural systems. It is designed to model complex, uncertain systems whose random outputs are strongly non-Gaussian given deterministic inputs. The architecture…

Machine Learning · Statistics 2025-12-12 Christian Soize

In this work, we introduce a new class of neural network operators designed to handle problems where memory effects and randomness play a central role. In this work, we introduce a new class of neural network operators designed to handle…

Machine Learning · Computer Science 2025-05-22 Rômulo Damasclin Chaves dos Santos , Jorge Henrique de Oliveira Sales

We develop a phenomenological coarse--graining procedure for activity in a large network of neurons, and apply this to recordings from a population of 1000+ cells in the hippocampus. Distributions of coarse--grained variables seem to…

Neurons and Cognition · Quantitative Biology 2019-10-30 Leenoy Meshulam , Jeffrey L. Gauthier , Carlos D. Brody , David W. Tank , William Bialek

Stochastic Human Motion Prediction (HMP) has received increasing attention due to its wide applications. Despite the rapid progress in generative fields, existing methods often face challenges in learning continuous temporal dynamics and…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Hua Yu , Yaqing Hou , Xu Gui , Shanshan Feng , Dongsheng Zhou , Qiang Zhang

In contexts where data samples represent a physically stable state, it is often assumed that the data points represent the local minima of an energy landscape. In control theory, it is well-known that energy can serve as an effective…

Machine Learning · Computer Science 2024-02-09 Christopher Iliffe Sprague , Arne Elofsson , Hossein Azizpour

We take up the challenge of designing realistic computational models of large interacting cell populations. The goal is essentially to bring Gillespie's celebrated stochastic methodology to the level of an interacting population of cells.…

Computational Engineering, Finance, and Science · Computer Science 2018-10-26 Stefan Engblom

We present a computer-assisted approach to coarse-graining the evolutionary dynamics of a system of nonidentical oscillators coupled through a (fixed) network structure. The existence of a spectral gap for the coupling network graph…

Statistical Mechanics · Physics 2015-05-28 Karthikeyan Rajendran , Ioannis G. Kevrekidis

The parametric behavior of regular periodic arrays of rising bubbles is investigated with the aid of 2-dimensional BGK Lattice-Boltzmann (LB) simulators. The Recursive Projection Method is implemented and coupled to the LB simulators,…

Pattern Formation and Solitons · Physics 2007-05-23 C. Theodoropoulos , K. Sankaranarayanan , S. Sundaresan , I. G. Kevrekidis

A unified approach to studying convergence and stochastic stability of continuous time consensus protocols (CPs) is presented in this work. Our method applies to networks with directed information flow; both cooperative and noncooperative…

Optimization and Control · Mathematics 2012-06-05 Georgi S. Medvedev

The time elapsed model describes the firing activity of an homogeneous assembly of neurons thanks to the distribution of times elapsed since the last discharge. It gives a mathematical description of the probability density of neurons…

Analysis of PDEs · Mathematics 2011-09-16 Khashayar Pakdaman , Benoît Perthame , Delphine Salort

We present a computer-assisted approach to approximating coarse optimal switching policies for systems described by microscopic/stochastic evolution rules. The coarse timestepper constitutes a bridge between the underlying kinetic Monte…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Antonios Armaou , Ioannis G. Kevrekidis