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In [1], we have shown that the dynamics of an interconnected population of excitatory and inhibitory spiking neurons wandering around a Bogdanov-Takens (BT)bifurcation point can generate the observed scale-free avalanches at the population…

Biological Physics · Physics 2022-04-05 Masud Ehsani , Jürgen Jost

For many complex dynamical systems, a separation of scales prevails between the (microscopic) level of description of the available model, and the (macroscopic) level at which one would like to observe and analyze the system. For this type…

Computational Physics · Physics 2007-05-23 Giovanni Samaey , Wim Vanroose , Dirk Roose , Ioannis G Kevrekidis

Among the different computational approaches modelling the dynamics of isogenic cell populations, discrete stochastic models can describe with sufficient accuracy the evolution of small size populations. However, for a systematic and…

Molecular Networks · Quantitative Biology 2013-12-16 I Aviziotis , M Kavousanakis , I Bitsanis , A Boudouvis

Time series forecasting based on deep architectures has been gaining popularity in recent years due to their ability to model complex non-linear temporal dynamics. The recurrent neural network is one such model capable of handling…

Machine Learning · Computer Science 2021-06-28 Zexuan Yin , Paolo Barucca

We identify a new type of pattern formation in spatially distributed active systems. We simulate one-dimensional two-component systems with predator-prey local interaction and pursuit-evasion taxis between the components. In a sufficiently…

Pattern Formation and Solitons · Physics 2013-05-29 V. N. Biktashev , M. A. Tsyganov

In this paper we present a general framework in which to rigorously study the effect of spatio-temporal noise on traveling waves and stationary patterns. In particular the framework can incorporate versions of the stochastic neural field…

Probability · Mathematics 2015-06-30 James Inglis , James MacLaurin

We present a simple technique for the computation of coarse-scale steady states of dynamical systems with time scale separation in the form of a "wrapper" around a fine-scale simulator. We discuss how this approach alleviates certain…

Computational Physics · Physics 2010-04-29 Christophe Vandekerckhove , Benjamin Sonday , Alexei Makeev , Dirk Roose , Ioannis G. Kevrekidis

Biological neural networks are notoriously hard to model due to their stochastic behavior and high dimensionality. We tackle this problem by constructing a dynamical model of both the expectations and covariances of the fractions of active…

Neurons and Cognition · Quantitative Biology 2025-02-25 Vincent Painchaud , Patrick Desrosiers , Nicolas Doyon

We show how the Equation-Free approach for multi-scale computations can be exploited to systematically study the dynamics of neural interactions on a random regular connected graph under a pairwise representation perspective. Using an…

Computational Engineering, Finance, and Science · Computer Science 2015-05-13 Konstantinos G. Spiliotis , Constantinos I. Siettos

We obtain exact travelling wave solutions for three families of stochastic one-dimensional nonequilibrium lattice models with open boundaries. These solutions describe the diffusive motion and microscopic structure of (i) of shocks in the…

Statistical Mechanics · Physics 2009-11-10 K. Krebs , F. H. Jafarpour , G. M. Schütz

We propose a new model based on the Ising model with the aim to study synaptic plasticity phenomena in neural networks. It is today well established in biology that the synapses or connections between certain types of neurons are…

Disordered Systems and Neural Networks · Physics 2016-07-22 Eugene Pechersky , Guillem Via , Anatoly Yambartsev

Machine learning techniques not only offer efficient tools for modelling dynamical systems from data, but can also be employed as frontline investigative instruments for the underlying physics. Nontrivial information about the original…

Data Analysis, Statistics and Probability · Physics 2021-02-24 Francesco Borra , Marco Baldovin

Continuous "bump" attractors are an established model of cortical working memory for continuous variables and can be implemented using various neuron and network models. Here, we develop a generalizable approach for the approximation of…

Neurons and Cognition · Quantitative Biology 2017-11-23 Alexander Seeholzer , Moritz Deger , Wulfram Gerstner

We address an iterative procedure that can be used to detect coarse-grained hyperbolic unstable equilibria (saddle points) of microscopic simulators when no equations at the macroscopic level are available. The scheme is based on the…

Dynamical Systems · Mathematics 2013-10-02 A. C. Tsoumanis , C. I. Siettos

Bottom-up models of functionally relevant patterns of neural activity provide an explicit link between neuronal dynamics and computation. A prime example of functional activity pattern is hippocampal replay, which is critical for memory…

Neurons and Cognition · Quantitative Biology 2024-09-30 Bastian Pietras , Valentin Schmutz , Tilo Schwalger

Complex coherent dynamics is present in a wide variety of neural systems. A typical example is the voltage transitions between up and down states observed in cortical areas in the brain. In this work, we study this phenomenon via a…

Neurons and Cognition · Quantitative Biology 2015-05-19 Jorge F. Mejias , Hilbert J. Kappen , Joaquin J. Torres

We implement a computer-assisted approach that, under appropriate conditions, allows the bifurcation analysis of the coarse dynamic behavior of microscopic simulators without requiring the explicit derivation of closed macroscopic equations…

Pattern Formation and Solitons · Physics 2009-11-07 Alexei G. Makeev , Dimitrios Maroudas , Ioannis G. Kevrekidis

Over the past few years it has been demonstrated that "coarse timesteppers" establish a link between traditional numerical analysis and microscopic/ stochastic simulation. The underlying assumption of the associated…

Biological Physics · Physics 2023-03-24 Constantinos I. Siettos

Despite the striking successes of deep neural networks trained with gradient-based optimization, these methods differ fundamentally from their biological counterparts. This gap raises key questions about how nature achieves robust,…

Machine Learning · Computer Science 2025-10-15 Mattia Scardecchia

In this paper, we investigate the existence, uniqueness, and spectral stability of traveling waves arising from a single threshold neural field model with one spatial dimension, a Heaviside firing rate function, axonal propagation delay,…

Dynamical Systems · Mathematics 2020-10-27 Alan Dyson