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We present the basic idea, implementation, measured performance and performance model of FDPS (Framework for developing particle simulators). FDPS is an application-development framework which helps the researchers to develop particle-based…

Instrumentation and Methods for Astrophysics · Physics 2016-06-15 Masaki Iwasawa , Ataru Tanikawa , Natsuki Hosono , Keigo Nitadori , Takayuki Muranushi , Junichiro Makino

The spatial join is a popular operation in spatial database systems and its evaluation is a well-studied problem. As main memories become bigger and faster and commodity hardware supports parallel processing, there is a need to revamp…

Databases · Computer Science 2020-05-25 Dimitrios Tsitsigkos , Panagiotis Bouros , Nikos Mamoulis , Manolis Terrovitis

This article introduces a highly parallel algorithm for molecular dynamics simulations with short-range forces on single node multi- and many-core systems. The algorithm is designed to achieve high parallel speedups for strongly…

Computational Physics · Physics 2013-11-20 R. Meyer

Hardware accelerators, such as those based on GPUs and FPGAs, offer an excellent opportunity to efficiently parallelize functionalities. Recently, modern embedded platforms started being equipped with such accelerators, resulting in a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-16 Daniel Casini , Paolo Pazzaglia , Alessandro Biondi , Marco Di Natale

The \emph{Partial Cache-Coherence (PCC)} model maintains hardware cache coherence only within subsets of cores, enabling large-scale memory sharing with emerging memory interconnect technologies like Compute Express Link (CXL). However,…

Operating Systems · Computer Science 2025-11-11 Fangnuo Wu , Mingkai Dong , Wenjun Cai , Jingsheng Yan , Haibo Chen

In the existing software development ecosystem, security issues introduced by third-party code cannot be overlooked. Among these security concerns, memory access vulnerabilities stand out prominently, leading to risks such as the theft or…

Cryptography and Security · Computer Science 2025-09-30 Yue Jin , Yibin Xu , Chengyuan Yang , Han Wang , Tianyi Huang , Tianyue Lu , Mingyu Chen

Stochastic gradient descent (SGD) is a widely adopted iterative method for optimizing differentiable objective functions. In this paper, we propose and discuss a novel approach to scale up SGD in applications involving non-convex functions…

Machine Learning · Statistics 2022-10-07 Saad Mohamad , Hamad Alamri , Abdelhamid Bouchachia

This paper consists of three parts. The first part provides a unified programming model for heterogeneous computing with CPU and accelerator (like GPU, FPGA, Google TPU, Atos QPU, and more) technologies. To some extent, this new programming…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-31 Yuqing Xiong

The paper adopts parallel computing systems for predictive analysis in both CPU and GPU leveraging Spark Big Data platform. The traffic dataset is adopted to predict the traffic jams in Los Angeles County. It is collected from a popular…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-30 Dalyapraz Dauletbak , Junghoon Heo , Sooyoung Kim , Yeon Pyo Kim , Jongwook Woo

We investigate the concept of rendering production-style content with full path tracing in a data-distributed fashion -- that is, with multiple collaborating nodes and/or GPUs that each store only part of the model. In particular, we…

Graphics · Computer Science 2022-04-22 Ingo Wald , Steven G Parker

Probabilistic circuits (PCs) enable us to learn joint distributions over a set of random variables and to perform various probabilistic queries in a tractable fashion. Though the tractability property allows PCs to scale beyond…

Machine Learning · Computer Science 2025-03-12 Jonas Seng , Florian Peter Busch , Pooja Prasad , Devendra Singh Dhami , Martin Mundt , Kristian Kersting

The two main thrusts of computational science are more accurate predictions and faster calculations; to this end, the zeitgeist in molecular dynamics (MD) simulations is pursuing machine learned and data driven interatomic models, e.g.…

Computational Physics · Physics 2020-02-24 Saaketh Desai , Samuel Temple Reeve , James F. Belak

This article presents svds-C, an open-source and high-performance C program for accurately and robustly computing truncated SVD, e.g. computing several largest singular values and corresponding singular vectors. We have re-implemented the…

Mathematical Software · Computer Science 2024-05-30 Xu Feng , Wenjian Yu , Yuyang Xie

Matrix multiplication is a foundational operation in scientific computing and machine learning, yet its computational complexity makes it a significant bottleneck for large-scale applications. The shift to parallel architectures, primarily…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-30 Mufakir Qamar Ansari , Mudabir Qamar Ansari

Control parallelism and data parallelism is mostly reasoned and optimized as separate functions. Because of this, workloads that are irregular, fine-grain and dynamic such as dynamic graph processing become very hard to scale. An…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-08 Bibrak Qamar Chandio , Thomas Sterling , Prateek Srivastava

The complexity of heterogeneous computing architectures, as well as the demand for productive and portable parallel application development, have driven the evolution of parallel programming models to become more comprehensive and complex…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-31 Anjia Wang , Xinyao Yi , Yonghong Yan

Modern hardware platforms, from the very small to the very large, increasingly provide parallel and distributed computing resources for applications to maximise performance. Many applications therefore need to make effective use of tens,…

Programming Languages · Computer Science 2019-04-02 Francisco Martins , Dominic Orchard

The Adapteva Epiphany many-core architecture comprises a scalable 2D mesh Network-on-Chip (NoC) of low-power RISC cores with minimal uncore functionality. Whereas such a processor offers high computational energy efficiency and parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-28 David Richie , James Ross , Jamie Infantolino

These lecture notes are designed to accompany an imaginary, virtual, undergraduate, one or two semester course on fundamentals of Parallel Computing as well as to serve as background and reference for graduate courses on High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-02 Jesper Larsson Träff

Concurrent linearizable access to shared objects can be prohibitively expensive in a high contention workload. Many applications apply ad-hoc techniques to eliminate the need of synchronous atomic updates, which may result in…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-11 Deepthi Devaki Akkoorath , José Brandão , Annette Bieniusa , Carlos Baquero