Related papers: Some Results on Superpatterns for Preferential Arr…
String matching is the problem of deciding whether a given $n$-bit string contains a given $k$-bit pattern. We study the complexity of this problem in three settings. Communication complexity. For small $k$, we provide near-optimal upper…
Consider two independent random strings having same length and taking values uniformly in a common finite alphabet. We study the order of the variance of the length of the longest common subsequences (LCS) of these strings when long blocks,…
We study here the so called subsequence pattern matching also known as hidden pattern matching in which one searches for a given pattern $w$ of length $m$ as a subsequence in a random text of length $n$. The quantity of interest is the…
We show that the $N=2$ superstrings may be viewed as a special class of the $N=4$ superstrings and demonstrate their equivalence. This allows us to realize all known string theories based on linear algebras and with $N<4$ supersymmetries as…
This paper considers a hyperplane arrangement constructed with a subset of a set of all simple paths in a graph. A connection of the constructed arrangement to the maximum matching problem is established. Moreover, the problem of finding…
Recently Kubica et al. (Inf. Process. Let., 2013) and Kim et al. (submitted to Theor. Comp. Sci.) introduced order-preserving pattern matching. In this problem we are looking for consecutive substrings of the text that have the same "shape"…
In this paper, we propose a new indexing structure for parameterized strings which we call PLSTs, by generalizing linear-size suffix tries for ordinary strings. Two parameterized strings are said to match if there is a bijection on the…
We introduce a new combinatorial structure: the superselector. We show that superselectors subsume several important combinatorial structures used in the past few years to solve problems in group testing, compressed sensing, multi-channel…
A weighted string over an alphabet of size $\sigma$ is a string in which a set of letters may occur at each position with respective occurrence probabilities. Weighted strings, also known as position weight matrices or uncertain sequences,…
We study the complexity of the problem of searching for a set of patterns that separate two given sets of strings. This problem has applications in a wide variety of areas, most notably in data mining, computational biology, and in…
In this paper, we consider the problem of identifying patterns of interest in colored strings. A colored string is a string where each position is assigned one of a finite set of colors. Our task is to find substrings of the colored string…
Superposition is an established decision procedure for a variety of first-order logic theories represented by sets of clauses. A satisfiable theory, saturated by superposition, implicitly defines a minimal term-generated model for the…
In the context of the genome rearrangement problem, we analyze two well known models, namely the block transposition and the prefix block transposition models, by exploiting the connection with the notion of permutation pattern. More…
We prove that it is decidable if a finitely based permutation class contains infinitely many simple permutations, and establish an unavoidable substructure result for simple permutations: every sufficiently long simple permutation contains…
Frequent pattern mining is a flagship problem in data mining. In its most basic form, it asks for the set of substrings of a given string $S$ of length $n$ that occur at least $\tau$ times in $S$, for some integer $\tau\in[1,n]$. We…
Sequence theories are an extension of theories of strings with an infinite alphabet of letters, together with a corresponding alphabet theory (e.g. linear integer arithmetic). Sequences are natural abstractions of extendable arrays, which…
The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…
A permutation $\pi$ contains a permutation $\sigma$ as a pattern if it contains a subsequence of length $|\sigma|$ whose elements are in the same relative order as in the permutation $\sigma$. This notion plays a major role in enumerative…
Let us call a sequence of numbers heapable if they can be sequentially inserted to form a binary tree with the heap property, where each insertion subsequent to the first occurs at a leaf of the tree, i.e. below a previously placed number.…
Firstly studied by Kempa and Prezza in 2018 as the cement of text compression algorithms, string attractors have become a compelling object of theoretical research within the community of combinatorics on words. In this context, they have…