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In machine learning, graph embedding algorithms seek low-dimensional representations of the input network data, thereby allowing for downstream tasks on compressed encodings. Recently, within the framework of network renormalization,…

Physics and Society · Physics 2025-08-29 Riccardo Milocco , Fabian Jansen , Diego Garlaschelli

The problem of accelerating drug discovery relies heavily on automatic tools to optimize precursor molecules to afford them with better biochemical properties. Our work in this paper substantially extends prior state-of-the-art on…

Chemical Physics · Physics 2019-10-22 Wengong Jin , Regina Barzilay , Tommi Jaakkola

Graph classification is crucial in network analyses. Networks face potential security threats, such as adversarial attacks. Some defense methods may trade off the algorithm complexity for robustness, such as adversarial training, whereas…

Machine Learning · Computer Science 2023-02-07 Jinyin Chen , Haiyang Xiong , Haibin Zhenga , Dunjie Zhang , Jian Zhang , Mingwei Jia , Yi Liu

Attributed graph clustering is challenging as it requires joint modelling of graph structures and node attributes. Recent progress on graph convolutional networks has proved that graph convolution is effective in combining structural and…

Machine Learning · Computer Science 2019-06-05 Xiaotong Zhang , Han Liu , Qimai Li , Xiao-Ming Wu

Graph coarsening is a widely used dimensionality reduction technique for approaching large-scale graph machine learning problems. Given a large graph, graph coarsening aims to learn a smaller-tractable graph while preserving the properties…

Machine Learning · Statistics 2022-10-04 Manoj Kumar , Anurag Sharma , Sandeep Kumar

Clustering a graph means identifying internally dense subgraphs which are only sparsely interconnected. Formalizations of this notion lead to measures that quantify the quality of a clustering and to algorithms that actually find…

Data Structures and Algorithms · Computer Science 2011-12-12 Robert Görke , Andrea Schumm , Dorothea Wagner

We investigate the statistical properties of cut sizes generated by heuristic algorithms which solve approximately the graph bisection problem. On an ensemble of sparse random graphs, we find empirically that the distribution of the cut…

Statistical Mechanics · Physics 2007-05-23 G. R. Schreiber , O. C. Martin

One of the fundamental and most-studied algorithmic problems in distributed computing on networks is graph coloring, both in bounded-degree and in general graphs. Recently, the study of this problem has been extended in two directions.…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-14 Nicolas Bousquet , Laurent Feuilloley , Marc Heinrich , Mikaël Rabie

Graphs have become increasingly popular in modeling structures and interactions in a wide variety of problems during the last decade. Graph-based clustering and semi-supervised classification techniques have shown impressive performance.…

Machine Learning · Computer Science 2020-09-01 Zhao Kang , Chong Peng , Qiang Cheng , Xinwang Liu , Xi Peng , Zenglin Xu , Ling Tian

Graphs naturally appear in several real-world contexts including social networks, the web network, and telecommunication networks. While the analysis and the understanding of graph structures have been a central area of study in algorithm…

Data Structures and Algorithms · Computer Science 2019-09-17 Gramoz Goranci

In this paper we discuss reconstruction problems for graphs. We develop some new ideas like isomorphic extension of isomorphic graphs, partitioning of vertex sets into sets of equivalent points, subdeck property, etc. and develop an…

General Mathematics · Mathematics 2011-10-21 Dhananjay P. Mehendale

A traversal of a connected graph is a linear ordering of its vertices all of whose initial segments induce connected subgraphs. Traversals, and their refinements such as breadth-first and depth-first traversals, are computed by various…

Logic · Mathematics 2018-10-24 Siddharth Bhaskar , Anton Jay Kienzle

In this article, we extend several algebraic graph analysis methods to bipartite networks. In various areas of science, engineering and commerce, many types of information can be represented as networks, and thus the discipline of network…

Discrete Mathematics · Computer Science 2015-01-16 Jérôme Kunegis

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Many large-scale Web applications that require ranked top-k retrieval such as Web search and online advertising are implemented using inverted indices. An inverted index represents a sparse term-document matrix, where non-zero elements…

Information Retrieval · Computer Science 2015-03-19 George Beskales , Marcus Fontoura , Maxim Gurevich , Sergei Vassilvitskii , Vanja Josifovski

We present a novel method for graph partitioning, based on reinforcement learning and graph convolutional neural networks. Our approach is to recursively partition coarser representations of a given graph. The neural network is implemented…

Machine Learning · Computer Science 2021-06-30 Alice Gatti , Zhixiong Hu , Tess Smidt , Esmond G. Ng , Pieter Ghysels

Graph signals arise in various applications, ranging from sensor networks to social media data. The high-dimensional nature of these signals implies that they often need to be compressed in order to be stored and transmitted. The common…

Signal Processing · Electrical Eng. & Systems 2021-10-26 Pei Li , Nir Shlezinger , Haiyang Zhang , Baoyun Wang , Yonina C. Eldar

Graph clustering (or community detection) has long drawn enormous attention from the research on web mining and information networks. Recent literature on this topic has reached a consensus that node contents and link structures should be…

Social and Information Networks · Computer Science 2017-12-25 Carl Yang , Mengxiong Liu , Zongyi Wang , Liyuan Liu , Jiawei Han

Graph coarsening aims to diminish the size of a graph to lighten its memory footprint, and has numerous applications in graph signal processing and machine learning. It is usually defined using a reduction matrix and a lifting matrix,…

Machine Learning · Computer Science 2026-01-29 Antonin Joly , Nicolas Keriven , Aline Roumy

Given graphs as input, Graph Neural Networks (GNNs) support the inference of nodes, edges, attributes, or graph properties. Graph Rewriting investigates the rule-based manipulation of graphs to model complex graph transformations. We…

Machine Learning · Computer Science 2023-05-31 Adam Machowczyk , Reiko Heckel