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In recent years many algorithms have been developed for finding patterns in graphs and networks. A disadvantage of these algorithms is that they use subgraph isomorphism to determine the support of a graph pattern; subgraph isomorphism is a…

Data Structures and Algorithms · Computer Science 2015-03-19 Anton Dries , Siegfried Nijssen

Tolerance graphs model interval relations in such a way that intervals can tolerate a certain amount of overlap without being in conflict. In one of the most natural generalizations of tolerance graphs with direct applications in the…

Computational Complexity · Computer Science 2016-05-17 Archontia C. Giannopoulou , George B. Mertzios

This thesis focuses on two concepts which are widely studied in the field of computational geometry. Namely, visibility and unit disk graphs. In the field of visibility, we have studied the conflict-free chromatic guarding of polygons, for…

Computational Geometry · Computer Science 2021-11-02 Onur Çağırıcı

IC-planar graphs are those graphs that admit a drawing where no two crossed edges share an end-vertex and each edge is crossed at most once. They are a proper subfamily of the 1-planar graphs. Given an embedded IC-planar graph $G$ with $n$…

Computational Geometry · Computer Science 2016-07-19 Franz J. Brandenburg , Walter Didimo , William S. Evans , Philipp Kindermann , Giuseppe Liotta , Fabrizio Montecchiani

A graph H is a square root of a graph G if G can be obtained from H by adding an edge between any two vertices in H that are of distance 2. The Square Root problem is that of deciding whether a given graph admits a square root. This problem…

Data Structures and Algorithms · Computer Science 2016-08-30 Manfred Cochefert , Jean-François Couturier , Petr A. Golovach , Dieter Kratsch , Daniël Paulusma , Anthony Stewart

We prove that Graph Isomorphism and Canonization in graphs excluding a fixed graph $H$ as a minor can be solved by an algorithm working in time $f(H)\cdot n^{O(1)}$, where $f$ is some function. In other words, we show that these problems…

Data Structures and Algorithms · Computer Science 2022-10-27 Daniel Lokshtanov , Marcin Pilipczuk , Michał Pilipczuk , Saket Saurabh

Combining the the results of A.R. Meyer and L.J. Stockmeyer "The Equivalence Problem for Regular Expressions with Squaring Requires Exponential Space", and K.S. Booth "Isomorphism testing for graphs, semigroups, and finite automata are…

Computational Complexity · Computer Science 2007-08-31 Matthew Delacorte

Building on work of Cai, F\"urer, and Immerman \cite{CFI92}, we show two hardness results for the Graph Isomorphism problem. First, we show that there are pairs of nonisomorphic $n$-vertex graphs $G$ and $H$ such that any sum-of-squares…

Computational Complexity · Computer Science 2014-01-13 Ryan O'Donnell , John Wright , Chenggang Wu , Yuan Zhou

For a class $\mathcal{G}$ of graphs, the objective of \textsc{Subgraph Complementation to} $\mathcal{G}$ is to find whether there exists a subset $S$ of vertices of the input graph $G$ such that modifying $G$ by complementing the subgraph…

Data Structures and Algorithms · Computer Science 2023-03-29 Dhanyamol Antony , Sagartanu Pal , R. B. Sandeep

Presented approach in polynomial time calculates large number of invariants for each vertex, which won't change with graph isomorphism and should fully determine the graph. For example numbers of closed paths of length k for given starting…

Computational Complexity · Computer Science 2008-05-19 Jarek Duda

Current graph neural networks (GNNs) lack generalizability with respect to scales (graph sizes, graph diameters, edge weights, etc..) when solving many graph analysis problems. Taking the perspective of synthesizing graph theory programs,…

Machine Learning · Computer Science 2020-10-27 Hao Tang , Zhiao Huang , Jiayuan Gu , Bao-Liang Lu , Hao Su

Subgraph isomorphism counting is known as #P-complete and requires exponential time to find the accurate solution. Utilizing representation learning has been shown as a promising direction to represent substructures and approximate the…

Machine Learning · Computer Science 2024-05-14 Xin Liu , Weiqi Wang , Jiaxin Bai , Yangqiu Song

Deep neural networks have enabled researchers to create powerful generalized frameworks, such as transformers, that can be used to solve well-studied problems in various application domains, such as text and image. However, such generalized…

Machine Learning · Computer Science 2025-02-12 Rudrajit Dawn , Madhusudan Ghosh , Partha Basuchowdhuri , Sudip Kumar Naskar

Given two graphs $G$ and $H$, we say that $G$ contains $H$ as an induced minor if a graph isomorphic to $H$ can be obtained from $G$ by a sequence of vertex deletions and edge contractions. We study the complexity of Graph Isomorphism on…

Discrete Mathematics · Computer Science 2016-05-30 Rémy Belmonte , Yota Otachi , Pascal Schweitzer

We investigate the asymptotic number of induced subgraphs in power-law uniform random graphs. We show that these induced subgraphs appear typically on vertices with specific degrees, which are found by solving an optimization problem.…

Combinatorics · Mathematics 2022-02-23 Clara Stegehuis

In recent work by Johnson et al. (2022), a framework was described for the study of graph problems over classes specified by omitting each of a finite set of graphs as subgraphs. If a problem falls into the framework then its computational…

Computational Complexity · Computer Science 2025-03-17 Tala Eagling-Vose , Barnaby Martin , Daniel Paulusma , Siani Smith

We propose a novel benchmarking methodology for graph neural networks (GNNs) based on the graph alignment problem, a combinatorial optimization task that generalizes graph isomorphism by aligning two unlabeled graphs to maximize overlapping…

Machine Learning · Computer Science 2025-05-20 Adrien Lagesse , Marc Lelarge

Given a function $f$ in a finite field ${\mathbb F}_q$ of $q$ elements, we define the functional graph of $f$ as a directed graph on $q$ nodes labelled by the elements of ${\mathbb F}_q$ where there is an edge from $u$ to $v$ if and only if…

Number Theory · Mathematics 2015-05-27 Sergei V. Konyagin , Florian Luca , Bernard Mans , Luke Mathieson , Min Sha , Igor E. Shparlinski

Notions of graph similarity provide alternative perspective on the graph isomorphism problem and vice-versa. In this paper, we consider measures of similarity arising from mismatch norms as studied in Gervens and Grohe: the edit distance…

Discrete Mathematics · Computer Science 2026-05-07 He Sun , Danny Vagnozzi

We study a variant of the subgraph isomorphism problem that is of high interest to the quantum computing community. Our results give an algorithm to perform pattern matching in quantum circuits for many patterns simultaneously,…

Quantum Physics · Physics 2024-02-22 Luca Mondada , Pablo Andrés-Martínez