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Transposed elements (TEs) are mobile genetic sequences. During the evolution of eukaryotes TEs were inserted into active protein-coding genes, affecting gene structure, expression and splicing patterns, and protein sequences. Genomic…

Genomics · Quantitative Biology 2008-11-24 Asaf Levy , Noa Sela , Gil Ast

A-To-I RNA editing is common to all eukaryotes, associated with various neurological functions. Recently, A-to-I editing was found to occur abundantly in the human transcriptome. Here we show that the frequency of A-to-I editing in humans…

Genomics · Quantitative Biology 2007-05-23 Eli Eisenberg , Sergey Nemzer , Yaron Kinar , Rotem Sorek , Gideon Rechavi , Erez Y. Levanon

Understanding relationships across multiple imaging modalities is central to neuroimaging research. We introduce the Integrative Variational Autoencoder (InVA), the first hierarchical VAE framework for image-on-image regression in…

Image and Video Processing · Electrical Eng. & Systems 2025-09-15 Bowen Lei , Yeseul Jeon , Rajarshi Guhaniyogi , Aaron Scheffler , Bani Mallick , Alzheimer's Disease Neuroimaging Initiatives

During evolution of microorganisms genomes underwork have different changes in their lengths, gene orders, and gene contents. Investigating these structural rearrangements helps to understand how genomes have been modified over time. Some…

Genomics · Quantitative Biology 2017-06-27 Huda Al-Nayyef , Christophe Guyeux , Marie Petitjean , Didier Hocquet , Jacques M. Bahi

The human visual system has a hierarchical structure consisting of layers of processing, such as the retina, V1, V2, etc. Understanding the functional roles of these visual processing layers would help to integrate the psychophysiological…

Computer Vision and Pattern Recognition · Computer Science 2014-12-19 Honghao Shan , Garrison Cottrell

Transfer learning represents a recent paradigm shift in the way we build artificial intelligence (AI) systems. In contrast to training task-specific models, transfer learning involves pre-training deep learning models on a large corpus of…

The deviation between chronological age and biological age is a well-recognized biomarker associated with cognitive decline and neurodegeneration. Age-related and pathology-driven changes to brain structure are captured by various…

Machine Learning · Computer Science 2022-11-01 Saurabh Sihag , Gonzalo Mateos , Corey McMillan , Alejandro Ribeiro

With distinct advantages in power over behavioral phenotypes, brain imaging traits have become emerging endophenotypes to dissect molecular contributions to behaviors and neuropsychiatric illnesses. Among different imaging features, brain…

Applications · Statistics 2022-12-05 Yize Zhao , Changgee Chang , Jingwen Zhang , Zhengwu Zhang

Vision-Language-Action (VLA) models have emerged as a promising approach for general-purpose robot manipulation. However, their generalization is inconsistent: while these models can perform impressively in some settings, fine-tuned…

Robotics · Computer Science 2026-03-20 Aiden Swann , Lachlain McGranahan , Hugo Buurmeijer , Monroe Kennedy , Mac Schwager

Vector-symbolic architectures (VSAs) provide methods for computing which are highly flexible and carry unique advantages. Concepts in VSAs are represented by 'symbols,' long vectors of values which utilize properties of high-dimensional…

Machine Learning · Computer Science 2022-07-20 Wilkie Olin-Ammentorp Maxim Bazhenov

The emergence of spontaneous symmetry breaking among a few heads of multi-head attention (MHA) across transformer blocks in classification tasks was recently demonstrated through the quantification of single-nodal performance (SNP). This…

Computer Vision and Pattern Recognition · Computer Science 2025-07-01 Ronit D. Gross , Tal Halevi , Ella Koresh , Yarden Tzach , Ido Kanter

The combination of Spiking Neural Networks (SNNs) and Vision Transformers (ViTs) holds potential for achieving both energy efficiency and high performance, particularly suitable for edge vision applications. However, a significant…

Computer Vision and Pattern Recognition · Computer Science 2025-02-19 Shuai Wang , Malu Zhang , Dehao Zhang , Ammar Belatreche , Yichen Xiao , Yu Liang , Yimeng Shan , Qian Sun , Enqi Zhang , Yang Yang

Skeleton-based human action recognition has recently attracted increasing attention due to the popularity of 3D skeleton data. One main challenge lies in the large view variations in captured human actions. We propose a novel view…

Computer Vision and Pattern Recognition · Computer Science 2017-08-07 Pengfei Zhang , Cuiling Lan , Junliang Xing , Wenjun Zeng , Jianru Xue , Nanning Zheng

The comparative genomics revolution of the past decade has enabled the discovery of functional elements in the human genome via sequence comparison. While that is so, an important class of elements, those specific to humans, is entirely…

Populations and Evolution · Quantitative Biology 2015-11-24 Daniel R. Schrider , Andrew D. Kern

Gene set enrichment analyses of 8,405 genes linked with 35,074 human-specific (hs) regulatory single-nucleotide changes (SNCs) revealed the staggering breadth of significant associations with morphological structures, physiological…

Genomics · Quantitative Biology 2025-12-30 Gennadi V. Glinsky

There are two de facto standard architectures in recent computer vision: Convolutional Neural Networks (CNNs) and Vision Transformers (ViTs). Strong inductive biases of convolutions help the model learn sample effectively, but such strong…

Computer Vision and Pattern Recognition · Computer Science 2022-10-05 Yunsung Lee , Gyuseong Lee , Kwangrok Ryoo , Hyojun Go , Jihye Park , Seungryong Kim

Darwinian evolution of the biological brain is documented through multiple lines of evidence, although the modes of evolutionary changes remain unclear. Drawing inspiration from the evolved neural systems (e.g., visual cortex), deep…

Neural and Evolutionary Computing · Computer Science 2024-08-13 Guodong Du , Runhua Jiang , Senqiao Yang , Haoyang Li , Wei Chen , Keren Li , Sim Kuan Goh , Ho-Kin Tang

As the third generation of neural networks, spiking neural networks (SNNs) are dedicated to exploring more insightful neural mechanisms to achieve near-biological intelligence. Intuitively, biomimetic mechanisms are crucial to understanding…

Neural and Evolutionary Computing · Computer Science 2023-03-15 Haibo Shen , Yihao Luo , Xiang Cao , Liangqi Zhang , Juyu Xiao , Tianjiang Wang

For medical image semantic segmentation (MISS), Vision Transformers have emerged as strong alternatives to convolutional neural networks thanks to their inherent ability to capture long-range correlations. However, existing research uses…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Qianying Liu , Chaitanya Kaul , Jun Wang , Christos Anagnostopoulos , Roderick Murray-Smith , Fani Deligianni

Convolutional Neural Networks (CNNs) inherently encode strong inductive biases, enabling effective generalization on small-scale datasets. In this paper, we propose integrating this inductive bias into ViTs, not through an architectural…

Computer Vision and Pattern Recognition · Computer Science 2025-12-09 Jianqiao Zheng , Xueqian Li , Hemanth Saratchandran , Simon Lucey