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The contemporary scientific landscape is characterized by a "curse of dimensionality," where our capacity to collect high-dimensional network data frequently outstrips our ability to computationally simulate or intuitively comprehend the…

General Physics · Physics 2026-02-03 Zebiao Li , XueYing Wu , Chengyi Tu

Finding suitable embeddings for connectomes (spatially embedded complex networks that map neural connections in the brain) is crucial for analyzing and understanding cognitive processes. Recent studies have found two-dimensional hyperbolic…

Neurons and Cognition · Quantitative Biology 2024-07-24 Dorota Celińska-Kopczyńska , Eryk Kopczyński

Finding a minimum vertex cover in a network is a fundamental NP-complete graph problem. One way to deal with its computational hardness, is to trade the qualitative performance of an algorithm (allowing non-optimal outputs) for an improved…

Data Structures and Algorithms · Computer Science 2023-12-14 Thomas Bläsius , Tobias Friedrich , Maximilian Katzmann

Understanding the structural complexity and predictability of complex networks is a central challenge in network science. Although recent studies have revealed a relationship between compression-based entropy and link prediction…

Social and Information Networks · Computer Science 2025-10-14 Sebastián Brzovic , Cristóbal Rojas , Andrés Abeliuk

Networks found in the real-world are numerous and varied. A common type of network is the heterogeneous network, where the nodes (and edges) can be of different types. Accordingly, there have been efforts at learning representations of…

Social and Information Networks · Computer Science 2021-06-21 Lili Wang , Chongyang Gao , Chenghan Huang , Ruibo Liu , Weicheng Ma , Soroush Vosoughi

The topological information is essential for studying the relationship between nodes in a network. Recently, Network Representation Learning (NRL), which projects a network into a low-dimensional vector space, has been shown their…

Social and Information Networks · Computer Science 2019-02-19 Guoji Fu , Chengbin Hou , Xin Yao

Signed network embedding methods aim to learn vector representations of nodes in signed networks. However, existing algorithms only managed to embed networks into low-dimensional Euclidean spaces whereas many intrinsic features of signed…

Machine Learning · Computer Science 2021-07-16 Wenzhuo Song , Hongxu Chen , Xueyan Liu , Hongzhe Jiang , Shengsheng Wang

Through the use of examples, we explain one way in which applied topology has evolved since the birth of persistent homology in the early 2000s. The first applications of topology to data emphasized the global shape of a dataset, such as…

Algebraic Topology · Mathematics 2021-04-23 Henry Adams , Michael Moy

Learning the representation of data with hierarchical structures in the hyperbolic space attracts increasing attention in recent years. Due to the constant negative curvature, the hyperbolic space resembles tree metrics and captures the…

Machine Learning · Computer Science 2022-02-21 Huiru Xiao , Caigao Jiang , Yangqiu Song , James Zhang , Junwu Xiong

One of the biggest needs in network science research is access to large realistic datasets. As data analytics methods permeate a range of diverse disciplines---e.g., computational epidemiology, sustainability, social media analytics,…

Social and Information Networks · Computer Science 2017-05-25 Malay Chakrabarti , Lenwood Heath , Naren Ramakrishnan

How can we design neural networks that allow for stable universal approximation of maps between topologically interesting manifolds? The answer is with a coordinate projection. Neural networks based on topological data analysis (TDA) use…

Machine Learning · Computer Science 2022-10-04 Michael Puthawala , Matti Lassas , Ivan Dokmanic , Pekka Pankka , Maarten de Hoop

Particle Swarm Optimization (PSO) is a metaheuristic global optimization paradigm that has gained prominence in the last two decades due to its ease of application in unsupervised, complex multidimensional problems which cannot be solved…

Neural and Evolutionary Computing · Computer Science 2019-01-07 Saptarshi Sengupta , Sanchita Basak , Richard Alan Peters

Complex systems and relational data are often abstracted as dynamical processes on networks. To understand, predict and control their behavior, a crucial step is to extract reduced descriptions of such networks. Inspired by notions from…

Social and Information Networks · Computer Science 2019-06-26 Michael T. Schaub , Jean-Charles Delvenne , Renaud Lambiotte , Mauricio Barahona

With the emergence of graph databases, the task of frequent subgraph discovery has been extensively addressed. Although the proposed approaches in the literature have made this task feasible, the number of discovered frequent subgraphs is…

Databases · Computer Science 2013-08-16 Wajdi Dhifli , Mohamed Moussaoui , Rabie Saidi , Engelbert Mephu Nguifo

Lying at the interface between Network Science and Machine Learning, node embedding algorithms take a graph as input and encode its structure onto output vectors that represent nodes in an abstract geometric space, enabling various…

Physics and Society · Physics 2025-10-03 Riccardo Milocco , Fabian Jansen , Diego Garlaschelli

We analyze the hyperbolicity of real-world networks, a geometric quantity that measures if a space is negatively curved. In our interpretation, a network with small hyperbolicity is "aristocratic", because it contains a small set of…

Physics and Society · Physics 2015-10-07 Michele Borassi , Alessandro Chessa , Guido Caldarelli

Stochastic Neighbor Embedding (SNE) methods minimize the divergence between the similarity matrix of a high-dimensional data set and its counterpart from a low-dimensional embedding, leading to widely applied tools for data visualization.…

Machine Learning · Computer Science 2018-09-13 Yao Lu , Jukka Corander , Zhirong Yang

Rigid body interactions are fundamental to numerous scientific disciplines, but remain challenging to simulate due to their abrupt nonlinear nature and sensitivity to complex, often unknown environmental factors. These challenges call for…

Machine Learning · Computer Science 2025-07-28 Amaury Wei , Olga Fink

Embedded topic models are able to learn interpretable topics even with large and heavy-tailed vocabularies. However, they generally hold the Euclidean embedding space assumption, leading to a basic limitation in capturing hierarchical…

Information Retrieval · Computer Science 2022-10-20 Yishi Xu , Dongsheng Wang , Bo Chen , Ruiying Lu , Zhibin Duan , Mingyuan Zhou

In large-scale recommender systems, the user-item networks are generally scale-free or expand exponentially. The latent features (also known as embeddings) used to describe the user and item are determined by how well the embedding space…

Information Retrieval · Computer Science 2022-05-31 Menglin Yang , Min Zhou , Jiahong Liu , Defu Lian , Irwin King
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