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We propose a Model-Based Clustering (MBC) method combined with loci selection using multi-allelic loci genetic data. The loci selection problem is regarded as a model selection problem and models in competition are compared with the…

Applications · Statistics 2008-12-31 Wilson Toussile , Elisabeth Gassiat

Microarrays are made it possible to simultaneously monitor the expression profiles of thousands of genes under various experimental conditions. Identification of co-expressed genes and coherent patterns is the central goal in microarray or…

Computational Engineering, Finance, and Science · Computer Science 2013-07-15 T. Chandrasekhar , K. Thangavel , E. Elayaraja , E. N. Sathishkumar

In many fields, researchers are interested in large and complex biological processes. Two important examples are gene expression and DNA methylation in genetics. One key problem is to identify aberrant patterns of these processes and…

Applications · Statistics 2012-10-03 Matthias Kormaksson , James G. Booth , Maria E. Figueroa , Ari Melnick

The expression levels of many thousands of genes can be measured simultaneously by DNA microarrays (chips). This novel experimental tool has revolutionized research in molecular biology and generated considerable excitement. A typical…

Biological Physics · Physics 2007-05-23 Eytan Domany

Learning-based image compression methods have improved in recent years and started to outperform traditional codecs. However, neural-network approaches can unexpectedly introduce visual artifacts in some images. We therefore propose methods…

Artificial Intelligence · Computer Science 2024-11-12 Daria Tsereh , Mark Mirgaleev , Ivan Molodetskikh , Roman Kazantsev , Dmitriy Vatolin

Photon counting detectors (PCDs) offer promising advancements in computed tomography (CT) imaging by enabling the quantification and 3D imaging of contrast agents and tissue types through multi-energy projections. However, the accuracy of…

Medical Physics · Physics 2023-10-18 Juan C. R. Luna , Mini Das

Prior work has shown Convolutional Neural Networks (CNNs) trained on surrogate Computer Aided Design (CAD) models are able to detect and classify real-world artefacts from photographs. The applications of which support twinning of digital…

Machine Learning · Computer Science 2021-06-07 Ric Real , James Gopsill , David Jones , Chris Snider , Ben Hicks

Microarrays are made it possible to simultaneously monitor the expression profiles of thousands of genes under various experimental conditions. Identification of co-expressed genes and coherent patterns is the central goal in microarray or…

Computational Engineering, Finance, and Science · Computer Science 2012-01-25 T. Chandrasekhar , K. Thangavel , E. Elayaraja

Motivation: Identifying interaction clusters of large gene regulatory networks (GRNs) is critical for its further investigation, while this task is very challenging, attributed to data noise in experiment data, large scale of GRNs, and…

Machine Learning · Computer Science 2019-10-22 Yu Chen , Yuanyuan Yang , Yaochu Jin , Xiufen Zou

Melanoma is a fatal skin cancer that is curable and has dramatically increasing survival rate when diagnosed at early stages. Learning-based methods hold significant promise for the detection of melanoma from dermoscopic images. However,…

Image and Video Processing · Electrical Eng. & Systems 2022-04-06 Saban Ozturk , Tolga Cukur

Synthetic DNA can in principle be used for the archival storage of arbitrary data. Because errors are introduced during DNA synthesis, storage, and sequencing, an error-correcting code (ECC) is necessary for error-free recovery of the data.…

Quantitative Methods · Quantitative Biology 2018-12-05 William H. Press , John A. Hawkins

Multi-view clustering has attracted much attention thanks to the capacity of multi-source information integration. Although numerous advanced methods have been proposed in past decades, most of them generally overlook the significance of…

Computer Vision and Pattern Recognition · Computer Science 2023-05-08 Rui Chen , Yongqiang Tang , Wensheng Zhang , Wenlong Feng

Agricultural weed detection on edge devices is subject to strict constraints on model capacity, computational resources, and real-time inference latency, which prevent performance improvements through model scaling or ensembling. This paper…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Yingda Yu , Jiaqi Xuan , Shuhui Shi , Xuanyu Teng , Shuyang Xu , Guanchao Tong

To understand complex biological systems, the research community has produced huge corpus of gene expression data. A large number of clustering approaches have been proposed for the analysis of gene expression data. However, extracting…

Computational Engineering, Finance, and Science · Computer Science 2010-03-28 Swathi. H

Clustering artworks is difficult for several reasons. On the one hand, recognizing meaningful patterns in accordance with domain knowledge and visual perception is extremely difficult. On the other hand, applying traditional clustering and…

Computer Vision and Pattern Recognition · Computer Science 2020-10-23 Giovanna Castellano , Gennaro Vessio

To identify novel dynamic patterns of gene expression, we develop a statistical method to cluster noisy measurements of gene expression collected from multiple replicates at multiple time points, with an unknown number of clusters. We…

Applications · Statistics 2013-12-02 Audrey Qiuyan Fu , Steven Russell , Sarah J. Bray , Simon Tavaré

Microarray technology is a process that allows thousands of genes simultaneously monitor to various experimental conditions. It is used to identify the co-expressed genes in specific cells or tissues that are actively used to make proteins,…

Computational Engineering, Finance, and Science · Computer Science 2013-07-16 T. Chandrasekhar , K. Thangavel , E. Elayaraja

A number of statistical models have been successfully developed for the analysis of high-throughput data from a single source, but few methods are available for integrating data from different sources. Here we focus on integrating gene…

Microarrays are made it possible to simultaneously monitor the expression profiles of thousands of genes under various experimental conditions. It is used to identify the co-expressed genes in specific cells or tissues that are actively…

Machine Learning · Computer Science 2012-03-15 T. Chandrasekhar , K. Thangavel , E. Elayaraja

Edge detection, as a fundamental task in computer vision, has garnered increasing attention. The advent of deep learning has significantly advanced this field. However, recent deep learning-based methods generally face two significant…

Computer Vision and Pattern Recognition · Computer Science 2024-12-20 Changsong Liu , Wei Zhang , Yanyan Liu , Mingyang Li , Wenlin Li , Yimeng Fan , Xiangnan Bai , Liang Zhang
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