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In this work we answer an open question asked by Johnson--Scoville. We show that each merge tree is represented by a discrete Morse function on a path. Furthermore, we present explicit constructions for two different but related kinds of…

Algebraic Topology · Mathematics 2023-01-04 Julian Brüggemann

When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…

Combinatorics · Mathematics 2012-10-11 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

This paper focuses on parallel hash functions based on tree modes of operation for an inner Variable-Input-Length function. This inner function can be either a single-block-length (SBL) and prefix-free MD hash function, or a sponge-based…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-13 Kevin Atighehchi , Robert Rolland

In this paper we consider two aspects of the inverse problem of how to construct merge trees realizing a given barcode. Much of our investigation exploits a recently discovered connection between the symmetric group and barcodes in general…

Algebraic Topology · Mathematics 2021-07-27 Justin Curry , Jordan DeSha , Adélie Garin , Kathryn Hess , Lida Kanari , Brendan Mallery

A decision tree looks like a simple directed acyclic computational graph, where only the leaf nodes specify the output values and the non-terminals specify their tests or split conditions. From the numerical perspective, we express decision…

Machine Learning · Computer Science 2024-11-07 Jinxiong Zhang

The tree based representation described in this paper, hereditarily binary numbers, applies recursively a run-length compression mechanism that enables computations limited by the structural complexity of their operands rather than by their…

Programming Languages · Computer Science 2013-07-18 Paul Tarau

Ensembles of decision trees are a useful tool for obtaining for obtaining flexible estimates of regression functions. Examples of these methods include gradient boosted decision trees, random forests, and Bayesian CART. Two potential…

Methodology · Statistics 2018-09-18 Antonio Ricardo Linero , Yun Yang

In a supercritical branching particle system, the trimmed tree consists of those particles which have descendants at all times. We develop this concept in the superprocess setting. For a class of continuous superprocesses with Feller…

Probability · Mathematics 2007-05-23 Klaus Fleischmann , Jan M. Swart

Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…

Data Structures and Algorithms · Computer Science 2020-07-01 Gabriel Cardona , Joan Carles Pons , Celine Scornavacca

In this paper we consider the enumeration of binary trees avoiding non-contiguous binary tree patterns. We begin by computing closed formulas for the number of trees avoiding a single binary tree pattern with 4 or fewer leaves and compare…

Combinatorics · Mathematics 2012-06-21 Michael Dairyko , Lara Pudwell , Samantha Tyner , Casey Wynn

We investigate the randomized decision tree complexity of a specific class of read-once threshold functions. A read-once threshold formula can be defined by a rooted tree, every internal node of which is labeled by a threshold function…

Computational Complexity · Computer Science 2023-10-19 Nikos Leonardos

A \emph{binary tanglegram} is a drawing of a pair of rooted binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example, in phylogenetics, it is essential…

Computational Geometry · Computer Science 2010-09-17 Kevin Buchin , Maike Buchin , Jaroslaw Byrka , Martin Nöllenburg , Yoshio Okamoto , Rodrigo I. Silveira , Alexander Wolff

Search trees are fundamental data structures in computer science. We study functionals on random search trees that satisfy recurrence relations of a simple additive form. Many important functionals including the space requirement, internal…

Probability · Mathematics 2007-05-23 Nevin Kapur

You might know that the name "tree transducers" refers to various kinds of automata that compute functions on ranked trees, i.e. terms over a first-order signature. But have you ever wondered about how to remember what a macro tree…

Formal Languages and Automata Theory · Computer Science 2024-09-12 Lê Thành Dũng Nguyên

We are interested in the quantitative analysis of the compaction ratio for two classical families of trees: recursive trees and plane binary increasing trees. These families are typical representatives of tree models with a small depth.…

Combinatorics · Mathematics 2021-09-14 Olivier Bodini , Antoine Genitrini , Bernhard Gittenberger , Isabella Larcher , Mehdi Naima

The motivation for this paper is the study of the phase transition for recurrence/transience of a class of self-interacting random walks on trees, which includes the once-reinforced random walk. For this purpose, we define a quantity, that…

Probability · Mathematics 2018-10-18 Andrea Collevecchio , Daniel Kious , Vladas Sidoravicius

The Horton laws originated in hydrology with a 1945 paper by Robert E. Horton, and for a long time remained a purely empirical finding. Ubiquitous in hierarchical branching systems, the Horton laws have been rediscovered in many disciplines…

Probability · Mathematics 2019-05-21 Yevgeniy Kovchegov , Ilya Zaliapin

Networks having the geometry and the connectivity of trees are considered as the spatial support of spatiotemporal dynamical processes. A tree is characterized by two parameters: its ramification and its depth. The local dynamics at the…

Pattern Formation and Solitons · Physics 2009-11-07 M. G. Cosenza , K. Tucci

Reconstructing a parsimonious phylogenetic network that displays multiple phylogenetic trees is an important problem in theory of phylogenetics, where the complexity of the inferred networks is measured by reticulation numbers. The…

Populations and Evolution · Quantitative Biology 2024-08-27 Yufeng Wu , Louxin Zhang

We describe arithmetic computations in terms of operations on some well known free algebras (S1S, S2S and ordered rooted binary trees) while emphasizing the common structure present in all them when seen as isomorphic with the set of…

Mathematical Software · Computer Science 2013-01-03 Paul Tarau
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