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This paper presents performance results comparing MPI-based implementations of the popular Conjugate Gradient (CG) method and several of its communication hiding (or 'pipelined') variants. Pipelined CG methods are designed to efficiently…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-17 Siegfried Cools , Jeffrey Cornelis , Pieter Ghysels , Wim Vanroose

The computational complexity of naive, sampling-based uncertainty quantification for 3D partial differential equations is extremely high. Multilevel approaches, such as multilevel Monte Carlo (MLMC), can reduce the complexity significantly,…

Computational Engineering, Finance, and Science · Computer Science 2016-07-13 Björn Gmeiner , Daniel Drzisga , Ulrich Ruede , Robert Scheichl , Barbara Wohlmuth

High-fidelity flow simulations are indispensable when analyzing systems exhibiting multiphase flow phenomena. The accuracy of multiphase flow simulations is strongly contingent upon the finest mesh resolution used to represent the…

Computational Physics · Physics 2023-04-05 Kumar Saurabh , Masado Ishii , Makrand A. Khanwale , Hari Sundar , Baskar Ganapathysubramanian

MPI+Threads, embodied by the MPI/OpenMP hybrid programming model, is a parallel programming paradigm where threads are used for on-node shared-memory parallelization and MPI is used for multi-node distributed-memory parallelization. OpenMP…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-31 Hui Zhou , Ken Raffenetti , Junchao Zhang , Yanfei Guo , Rajeev Thakur

We have developed an application and implemented parallel algorithms in order to provide a computational framework suitable for massively parallel supercomputers to study the unitary dynamics of quantum systems. We use renowned parallel…

Computational Physics · Physics 2018-11-20 Marlon Brenes , Vipin Kerala Varma , Antonello Scardicchio , Ivan Girotto

These lecture notes are designed to accompany an imaginary, virtual, undergraduate, one or two semester course on fundamentals of Parallel Computing as well as to serve as background and reference for graduate courses on High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-02 Jesper Larsson Träff

Many subsurface engineering applications involve tight-coupling between fluid flow, solid deformation, fracturing, and similar processes. To better understand the complex interplay of different governing equations, and therefore design…

Reservoir computing is a machine learning paradigm that uses a high-dimensional dynamical system, or \emph{reservoir}, to approximate and predict time series data. The scale, speed and power usage of reservoir computers could be enhanced by…

Neural and Evolutionary Computing · Computer Science 2022-11-16 Forrest C. Sheldon , Artemy Kolchinsky , Francesco Caravelli

We present Rhino, a system for accelerating tensor programs with automatic parallelization on AI platform for real production environment. It transforms a tensor program written for a single device into an equivalent distributed program…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-02-17 Shiwei Zhang , Lansong Diao , Siyu Wang , Zongyan Cao , Yiliang Gu , Chang Si , Ziji Shi , Zhen Zheng , Chuan Wu , Wei Lin

This paper addresses the reservoir design problem in the context of delay-based reservoir computers for multidimensional input signals, parallel architectures, and real-time multitasking. First, an approximating reservoir model is presented…

Neural and Evolutionary Computing · Computer Science 2015-10-15 Lyudmila Grigoryeva , Julie Henriques , Laurent Larger , Juan-Pablo Ortega

We describe the design, implementation and performance of the new hybrid parallelization scheme in our Monte Carlo radiative transfer code SKIRT, which has been used extensively for modeling the continuum radiation of dusty astrophysical…

Instrumentation and Methods for Astrophysics · Physics 2017-05-16 Sam Verstocken , Dries Van De Putte , Peter Camps , Maarten Baes

We present a "multipatch" infrastructure for numerical simulation of fluid problems in which sub-regions require different gridscales, different grid geometries, different physical equations, or different reference frames. Its key element…

Instrumentation and Methods for Astrophysics · Physics 2018-07-11 Hotaka Shiokawa , Roseanne M. Cheng , Scott C. Noble , Julian H. Krolik

The efficient solution of sparse, linear systems resulting from the discretization of partial differential equations is crucial to the performance of many physics-based simulations. The algorithmic optimality of multilevel approaches for…

Mathematical Software · Computer Science 2018-03-08 Andrew Reisner , Luke N. Olson , J. David Moulton

The trend towards highly parallel multi-processing is ubiquitous in all modern computer architectures, ranging from handheld devices to large-scale HPC systems; yet many applications are struggling to fully utilise the multiple levels of…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-19 Michael Lange , Gerard Gorman , Michele Weiland , Lawrence Mitchell , Xiaohu Guo , James Southern

This paper presents implementation details and empirical results for a hybrid message passing and shared memory paralleliziation of the adaptive integral method (AIM). AIM is implemented on a (near) petaflop supercomputing cluster of…

Computational Engineering, Finance, and Science · Computer Science 2010-10-08 Fangzhou Wei , Ali E. Yılmaz

This paper presents an efficient technique for matrix-vector and vector-transpose-matrix multiplication in distributed-memory parallel computing environments, where the matrices are unstructured, sparse, and have a substantially larger…

Mathematical Software · Computer Science 2018-12-04 Jonathan Eckstein , Gyorgy Matyasfalvi

OpenCAEPoro is a parallel numerical simulation software developed in C++ for simulating multiphase and multicomponent flows in porous media. The software utilizes a set of general-purpose compositional model equations, enabling it to handle…

Mathematical Software · Computer Science 2024-06-18 Shizhe Li , Chen-Song Zhang

This work introduces a novel, modular, layered web based platform for managing machine learning experiments on grid-based High Performance Computing infrastructures. The coupling of the communication services offered by the grid, with an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-12 Chairi Kiourt , Dimitris Kalles

We evaluate optimized parallel sparse matrix-vector operations for two representative application areas on widespread multicore-based cluster configurations. First the single-socket baseline performance is analyzed and modeled with respect…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske , Gerhard Wellein

Writing efficient hybrid parallel code is tedious, error-prone, and requires good knowledge of both parallel programming and multithreading such as MPI and OpenMP, resp. Therefore, we present a framework which is based on a job model that…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-03 Ralf-Peter Mundani , Marko Ljucović , Ernst Rank