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Emergent behavior in complex systems arises from nonlinear interactions among components, yet the intricate nature of self-organization often obscures the underlying causal relationships, long regarded as the "holy grail" of complexity…

Adaptation and Self-Organizing Systems · Physics 2025-10-14 Lina Yan , Jeffrey Huy Khong , Aleksandar Kostadinov , Wen-Jun Chen , Jerry Ying Hsi Fuh , Chih-Ming Ho

Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

Populations and Evolution · Quantitative Biology 2022-05-03 Zachary Jackson , BingKan Xue

The complexity of condensed matter arises from emergent behaviors that cannot be understood by analyzing individual constituents in isolation. While traditional condensed-matter approaches-developed primarily for ideal crystalline…

Materials Science · Physics 2025-09-30 Elisabetta Nocerino

The design space for a self-assembled multicomponent objects ranges from a solution in which every building block is unique to one with the minimum number of distinct building blocks that unambiguously define the target structure. Using a…

Soft Condensed Matter · Physics 2023-03-13 Joakim Bohlin , Andrew J. Turberfield , Ard A. Louis , Petr Šulc

In human and animal groups, social interactions often rely on the transmission of information via visual observation of the behavior of others. These visual interactions are governed by the laws of physics and sensory limits. Individuals…

Biological Physics · Physics 2021-06-21 Winnie Poel , Claudia Winklmayr , Pawel Romanczuk

We study a process of pattern formation for a generic model of species anchored to the nodes of a network where local reactions take place, and that experience non-reciprocal long-range interactions, encoded by the network directed links.…

Pattern Formation and Solitons · Physics 2025-10-22 Timoteo Carletti , Riccardo Muolo

The capacity region of the index coding problem is characterized through the notion of confusion graph and its fractional chromatic number. Based on this multiletter characterization, several structural properties of the capacity region are…

Information Theory · Computer Science 2015-04-28 Fatemeh Arbabjolfaei , Young-Han Kim

Accurately predicting the likelihood of interaction between two objects (compound-protein sequence, user-item, author-paper, etc.) is a fundamental problem in Computer Science. Current deep-learning models rely on learning accurate…

Machine Learning · Computer Science 2022-12-23 Apurva Kalia , Dilip Krishnan , Soha Hassoun

In wireless communication-based formation control systems, the control performance is significantly impacted by the channel capacity of each communication link between agents. This relationship, however, remains under-investigated in the…

Multiagent Systems · Computer Science 2025-01-07 Yaru Chen , Yirui Cong , Xiangyun Zhou , Long Cheng , Xiangke Wang

Previous studies have used numerical methods to optimize the hyperpolarizability of a one-dimensional quantum system. These studies were used to suggest properties of one-dimensional organic molecules, such as the degree of modulation of…

Optics · Physics 2015-05-18 Urszula B. Szafruga , Mark G. Kuzyk , David S. Watkins

A characteristic property of many soft matter systems is an ultrasoft effective interaction between their structural units. This softness often leads to complex behavior. In particular, ultrasoft systems under pressure demonstrate…

Soft Condensed Matter · Physics 2019-09-19 V. A. Levashov , R. E. Ryltsev , N. M. Chtchelkatchev

Strong coupling exhibits unique ability to preserve quantum sates between light and matter, which is essential for the development of quantum information technology. To explore the physical mechanism behind this phenomenon, we employ the…

We analyze the scaling of quantum Fisher information with the number of system particles in the limit of large number of particles, as a function of the number of parties interacting with each other, for encoding Hamiltonians having…

Quantum Physics · Physics 2026-02-05 Aparajita Bhattacharyya , Debarupa Saha , Ujjwal Sen

Can one demonstrate quantitative effects of diversity within a system comprised of distinct individuals on the performance of the system as a whole? Assuming that individuals can be different, we develop a model to interpolate between…

Physics and Society · Physics 2023-04-18 Julie Rowlett , Carl-Joar Karlsson , Medet Nursultanov

Symbolic systems operate over precise identities: variables denote specific objects, pointers target precise memory locations, and database keys refer to singular records. Neural embeddings generalize by compressing away semantic detail,…

Information Theory · Computer Science 2026-05-04 Tristan Simas

We use ideas from kinetic proofreading, an error-correcting mechanism in biology, to identify new kinetic regimes in non-equilibrium systems. These regimes are defined by the sensitivity of the occupancy of a state of the system to a change…

Statistical Mechanics · Physics 2014-04-30 Arvind Murugan , David A Huse , Stanislas Leibler

The structure of DNA Binding Proteins enables a strong interaction with their specific target site on DNA. However, recent single molecule experiment reported that proteins can diffuse on DNA. This suggests that the interactions between…

Biomolecules · Quantitative Biology 2015-05-13 Vincent Dahirel , Fabien Paillusson , Marie Jardat , Maria Barbi , Jean-Marc Victor

We study the interacting quintessence model with two different types of interaction by introducing a general parameterization of the quintessence potentials. The form of the quintessence potentials is arbitrary as the recent cosmological…

Cosmology and Nongalactic Astrophysics · Physics 2019-06-27 Nandan Roy , Kazuharu Bamba

Understanding the mechanisms that govern species coexistence and biodiversity represents a fundamental challenge in ecology. This study extends the classic rock-paper-scissors model by introducing a context-dependent higher-order…

Populations and Evolution · Quantitative Biology 2026-03-03 Chunpeng Du , Haoshu Wang , Yikang Lu , Lijuan Qin , Junpyo Park

A problem of substantial interest is to systematically map variation in chromatin structure to gene expression regulation across conditions, environments, or differentiated cell types. We developed and applied a quantitative framework for…

Quantitative Methods · Quantitative Biology 2015-03-05 Troels T. Marstrand , John D. Storey