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The weight space of an artificial neural network can be systematically explored using tools from statistical mechanics. We employ a combination of a hybrid Monte Carlo algorithm which performs long exploration steps, a ratchet-based…

Disordered Systems and Neural Networks · Physics 2025-07-25 Alessandro Zambon , Enrico M. Malatesta , Guido Tiana , Riccardo Zecchina

We introduce regenerative tree growth processes as consistent families of random trees with n labelled leaves, n>=1, with a regenerative property at branch points. This framework includes growth processes for exchangeably labelled Markov…

Probability · Mathematics 2013-09-30 Jim Pitman , Douglas Rizzolo , Matthias Winkel

Monitoring forest dynamics at an individual tree scale is essential for accurately assessing ecosystem responses to climate change, yet traditional methods relying on field-based forest inventories are labor-intensive and limited in spatial…

Computer Vision and Pattern Recognition · Computer Science 2025-03-20 Matthew J. Allen , Harry J. F. Owen , Stuart W. D. Grieve , Emily R. Lines

Spatio-temporal areal data can be seen as a collection of time series which are spatially correlated according to a specific neighboring structure. Incorporating the temporal and spatial dimension into a statistical model poses challenges…

We propose MESA and DMESA as novel feature matching methods, which utilize Segment Anything Model (SAM) to effectively mitigate matching redundancy. The key insight of our methods is to establish implicit-semantic area matching prior to…

Computer Vision and Pattern Recognition · Computer Science 2025-03-28 Yesheng Zhang , Shuhan Shen , Xu Zhao

Latent manifolds provide a compact characterization of neural population activity and of shared co-variability across brain areas. Nonetheless, existing statistical tools for extracting neural manifolds face limitations in terms of…

Neurons and Cognition · Quantitative Biology 2022-09-08 Edoardo Balzani , Jean Paul Noel , Pedro Herrero-Vidal , Dora E. Angelaki , Cristina Savin

A longstanding open question in the field of dense disordered matter is how precisely structure and dynamics are related to each other. With the advent of machine learning, it has become possible to agnostically predict the dynamic…

Treemaps are a popular technique to visualize hierarchical data. The input is a weighted tree $\tree$ where the weight of each node is the sum of the weights of its children. A treemap for $\tree$ is a hierarchical partition of a rectangle…

Computational Geometry · Computer Science 2015-03-17 Mark de Berg , Bettina Speckmann , Vincent van der Weele

Feature matching is a crucial task in the field of computer vision, which involves finding correspondences between images. Previous studies achieve remarkable performance using learning-based feature comparison. However, the pervasive…

Computer Vision and Pattern Recognition · Computer Science 2024-06-18 Yesheng Zhang , Xu Zhao

Understanding how cellular morphology, gene expression, and spatial context jointly shape tissue function is a central challenge in biology. Image-based spatial transcriptomics technologies now provide high-resolution measurements of cell…

Quantitative Methods · Quantitative Biology 2026-02-17 Zhenglun Kong , Mufan Qiu , John Boesen , Xiang Lin , Sukwon Yun , Tianlong Chen , Manolis Kellis , Marinka Zitnik

The genealogical structure of self-similar growth-fragmentations can be described in terms of a branching random walk. The so-called intrinsic area $\mathrm{A}$ arises in this setting as the terminal value of a remarkable additive…

Probability · Mathematics 2019-08-22 Jean Bertoin , Nicolas Curien , Igor Kortchemski

Decompositions of networks are useful not only for structural exploration. They also have implications and use in analysis and computational solution of processes (such as the Ising model, percolation, SIR model) running on a given network.…

Disordered Systems and Neural Networks · Physics 2020-04-29 Konstantin Klemm

In this work a composition-decomposition technique is presented that correlates tree eigenvectors with certain eigenvectors of an associated so-called skeleton forest. In particular, the matching properties of a skeleton determine the…

Combinatorics · Mathematics 2018-08-21 Torsten Sander , Jürgen W. Sander

Recently, S. Arlot and R. Genuer have shown that a model of random forests outperforms its single-tree counterpart in the estimation of $\alpha-$H\"older functions, $\alpha\leq2$. This backs up the idea that ensembles of tree estimators are…

Statistics Theory · Mathematics 2021-09-17 Thibault Randrianarisoa

Ecological communities exhibit pervasive patterns and inter-relationships between size, abundance, and the availability of resources. We use scaling ideas to develop a unified, model-independent framework for understanding the distribution…

Statistical Mechanics · Physics 2015-05-18 Filippo Simini , Tommaso Anfodillo , Marco Carrer , Jayanth R. Banavar , Amos Maritan

Random forest regression is a powerful non-parametric method that adapts to local data characteristics through data-driven partitioning, making it effective across diverse application domains. However, the piecewise constant nature of…

Machine Learning · Computer Science 2026-05-19 Ziyi Liu , Phuc Luong , Mario Boley , Daniel F. Schmidt

A geophylogeny is a phylogenetic tree (or dendrogram) where each leaf (e.g. biological taxon) has an associated geographic location (site). To clearly visualize a geophylogeny, the tree is typically represented as a crossing-free drawing…

Discrete Mathematics · Computer Science 2025-04-16 Jonathan Klawitter , Felix Klesen , Joris Y. Scholl , Thomas C. van Dijk , Alexander Zaft

The varying-coefficient model is a strong tool for the modelling of interactions in generalized regression. It is easy to apply if both the variables that are modified as well as the effect modifiers are known. However, in general one has a…

Methodology · Statistics 2017-05-25 Moritz Berger , Gerhard Tutz , Matthias Schmid

Random Forest (RF) is a well-known data-driven algorithm applied in several fields thanks to its flexibility in modeling the relationship between the response variable and the predictors, also in case of strong non-linearities. In…

Machine Learning · Statistics 2023-10-18 Luca Patelli , Michela Cameletti , Natalia Golini , Rosaria Ignaccolo

In this paper, we consider a tree inference problem motivated by the critical problem in single-cell genomics of reconstructing dynamic cellular processes from sequencing data. In particular, given a population of cells sampled from such a…

Methodology · Statistics 2025-07-16 Elodie Maignant , Tim Conrad , Christoph von Tycowicz