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Related papers: NED: An Inter-Graph Node Metric Based On Edit Dist…

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This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various…

Machine Learning · Computer Science 2019-05-14 Yujia Li , Chenjie Gu , Thomas Dullien , Oriol Vinyals , Pushmeet Kohli

Graph similarity computation aims to predict a similarity score between one pair of graphs to facilitate downstream applications, such as finding the most similar chemical compounds similar to a query compound or Fewshot 3D Action…

Machine Learning · Computer Science 2021-01-06 Haoyan Xu , Ziheng Duan , Jie Feng , Runjian Chen , Qianru Zhang , Zhongbin Xu , Yueyang Wang

Graph Neural Networks (GNNs) have proven to be powerful in many graph-based applications. However, they fail to generalize well under heterophilic setups, where neighbor nodes have different labels. To address this challenge, we employ a…

Machine Learning · Computer Science 2023-04-13 Yoonhyuk Choi , Jiho Choi , Taewook Ko , Chong-Kwon Kim

A key measure that has been used extensively in analyzing complex networks is the degree of a node (the number of the node's neighbors). Because of its discrete nature, when the degree measure was used in analyzing weighted networks,…

Physics and Society · Physics 2009-04-15 Sherief Abdallah

Network embedding, which aims to learn low-dimensional representations of nodes, has been used for various graph related tasks including visualization, link prediction and node classification. Most existing embedding methods rely solely on…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Homa Hosseinmardi , Emilio Ferrara , Aram Galstyan

Decompositional parameters such as treewidth are commonly used to obtain fixed-parameter algorithms for NP-hard graph problems. For problems that are W[1]-hard parameterized by treewidth, a natural alternative would be to use a suitable…

Data Structures and Algorithms · Computer Science 2022-03-01 Cornelius Brand , Esra Ceylan , Christian Hatschka , Robert Ganian , Viktoriia Korchemna

Most approaches that tackle the problem of node classification consider nodes to be similar, if they have shared neighbors or are close to each other in the graph. Recent methods for attributed graphs additionally take attributes of…

Machine Learning · Computer Science 2018-05-23 Evgeniy Faerman , Felix Borutta , Julian Busch , Matthias Schubert

Recently, a new way of avoiding crossings in straight-line drawings of non-planar graphs has been investigated. The idea of partial edge drawings (PED) is to drop the middle part of edges and rely on the remaining edge parts called stubs.…

Data selection seeks to identify a compact yet informative subset from large-scale training corpora, balancing sample quality against collection diversity. We formulate this problem as a Weighted Independent Set (WIS) on a similarity graph,…

Machine Learning · Computer Science 2026-05-21 Yuan Zhang , Lifeng Guo , Junwen Pan , Wenzhao Zheng , Wen Zhou , Kuan Cheng , Kurt Keutzer , Shanghang Zhang

We introduce the tree distance, a new distance measure on graphs. The tree distance can be computed in polynomial time with standard methods from convex optimization. It is based on the notion of fractional isomorphism, a characterization…

Discrete Mathematics · Computer Science 2021-04-30 Jan Böker

Graph Neural Networks (GNNs) have proven to excel in predictive modeling tasks where the underlying data is a graph. However, as GNNs are extensively used in human-centered applications, the issue of fairness has arisen. While edge deletion…

Machine Learning · Computer Science 2022-02-17 Donald Loveland , Jiayi Pan , Aaresh Farrokh Bhathena , Yiyang Lu

Graph comparison plays a major role in many network applications. We often need a similarity metric for comparing networks according to their structural properties. Various network features - such as degree distribution and clustering…

Social and Information Networks · Computer Science 2013-07-16 Sadegh Aliakbary , Sadegh Motallebi , Jafar Habibi , Ali Movaghar

An ordered labeled tree is a tree in which the nodes are labeled and the left-to-right order among siblings is relevant. The edit distance between two ordered labeled trees is the minimum cost of changing one tree into the other through a…

Data Structures and Algorithms · Computer Science 2015-02-10 Shihyen Chen

Despite the growing interest in characterizing the local geometry leading to the global topology of networks, our understanding of the local structure of complex networks, especially real-world networks, is still incomplete. Here, we…

Social and Information Networks · Computer Science 2020-12-08 Amirhossein Farzam , Areejit Samal , Jürgen Jost

Edges in real-world graphs are typically formed by a variety of factors and carry diverse relation semantics. For example, connections in a social network could indicate friendship, being colleagues, or living in the same neighborhood.…

Social and Information Networks · Computer Science 2022-02-24 Tianxiang Zhao , Xiang Zhang , Suhang Wang

The graph edit distance is an intuitive measure to quantify the dissimilarity of graphs, but its computation is NP-hard and challenging in practice. We introduce methods for answering nearest neighbor and range queries regarding this…

Databases · Computer Science 2022-07-20 Franka Bause , Erich Schubert , Nils M. Kriege

We present a framework for learning Node Embeddings from Static Subgraphs (NESS) using a graph autoencoder (GAE) in a transductive setting. NESS is based on two key ideas: i) Partitioning the training graph to multiple static, sparse…

Machine Learning · Computer Science 2023-05-24 Talip Ucar

The treewidth of a graph is an important invariant in structural and algorithmic graph theory. This paper studies the treewidth of line graphs. We show that determining the treewidth of the line graph of a graph $G$ is equivalent to…

Combinatorics · Mathematics 2014-09-25 Daniel J. Harvey , David R. Wood

Graph Neural Networks (GNNs) have been highly successful for the node classification task. GNNs typically assume graphs are homophilic, i.e. neighboring nodes are likely to belong to the same class. However, a number of real-world graphs…

Machine Learning · Computer Science 2024-09-20 Yurui Lai , Taiyan Zhang , Rui Fan

The generation of trees with a specified tree edit distance has significant applications across various fields, including computational biology, structured data analysis, and image processing. Recently, generative networks have been…

Machine Learning · Computer Science 2026-02-04 Mamoona Ghafoor , Tatsuya Akutsu