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Recent microscopy imaging techniques allow to precisely analyze cell morphology in 3D image data. To process the vast amount of image data generated by current digitized imaging techniques, automated approaches are demanded more than ever.…

Computer Vision and Pattern Recognition · Computer Science 2020-10-26 Dennis Eschweiler , Malte Rethwisch , Simon Koppers , Johannes Stegmaier

We develop a sampling scheme on the sphere that permits accurate computation of the spherical harmonic transform and its inverse for signals band-limited at $L$ using only $L^2$ samples. We obtain the optimal number of samples given by the…

Information Theory · Computer Science 2014-07-25 Zubair Khalid , Rodney A. Kennedy , Jason D. McEwen

We propose an algorithm for robust recovery of the spherical harmonic expansion of functions defined on the d-dimensional unit sphere $\mathbb{S}^{d-1}$ using a near-optimal number of function evaluations. We show that for any $f \in…

Numerical Analysis · Mathematics 2022-03-01 Amir Zandieh , Insu Han , Haim Avron

For the accurate representation and reconstruction of band-limited signals on the sphere, an optimal-dimensionality sampling scheme has been recently proposed which requires the optimal number of samples equal to the number of degrees of…

Information Theory · Computer Science 2017-09-11 Wajeeha Nafees , Zubair Khalid , Rodney A. Kennedy , Jason D. McEwen

X-ray single particle imaging involves the measurement of a large number of noisy diffraction patterns of isolated objects in random orientations. The missing information about these patterns is then computationally recovered in order to…

Image and Video Processing · Electrical Eng. & Systems 2020-05-25 Kartik Ayyer

The use of ray projections to reconstruct images is a common technique in medical imaging. Dealing with incomplete data is particularly important when a patient is vulnerable to potentially damaging radiation or is unable to cope with the…

Neural and Evolutionary Computing · Computer Science 2024-06-04 Mohammad Majid al-Rifaie , Tim Blackwell

Modern technology for producing extremely bright and coherent X-ray laser pulses provides the possibility to acquire a large number of diffraction patterns from individual biological nanoparticles, including proteins, viruses, and DNA.…

Methodology · Statistics 2018-07-11 Stefan Engblom , Carl Nettelblad , Jing Liu

This paper proposes a multi-shell sampling scheme and corresponding transforms for the accurate reconstruction of the diffusion signal in diffusion MRI by expansion in the spherical polar Fourier (SPF) basis. The sampling scheme uses an…

Computer Vision and Pattern Recognition · Computer Science 2017-05-15 Alice P. Bates , Zubair Khalid , Jason D. McEwen , Rodney A. Kennedy

We propose a sampling scheme on the sphere and develop a corresponding spherical harmonic transform (SHT) for the accurate reconstruction of the diffusion signal in diffusion magnetic resonance imaging (dMRI). By exploiting the antipodal…

Medical Physics · Physics 2015-02-26 Alice P. Bates , Zubair Khalid , Rodney A. Kennedy

We introduce a model-based iterative method to obtain shear modulus images of tissue using magnetic resonance elastography. The method jointly finds the displacement field that best fits multifrequency tissue displacement data and the…

Signal Processing · Electrical Eng. & Systems 2021-11-25 Shahed Mohammed , Mohammad Honarvar , Qi Zeng , Hoda Hashemi , Robert Rohling , Piotr Kozlowski , Septimiu Salcudean

We determine optimal designs for some regression models which are frequently used for describing three-dimensional shapes. These models are based on a Fourier expansion of a function defined on the unit sphere in terms of spherical harmonic…

Statistics Theory · Mathematics 2007-06-13 Holger Dette , Viatcheslav B. Melas , Andrey Pepelyshev

The short pulses of X-ray free electron lasers can produce diffraction patterns with structural information before radiation damage destroys the particle. The particles are injected into the beam in random orientations and they should be…

Data Analysis, Statistics and Probability · Physics 2013-07-31 Miklós Tegze , Gábor Bortel

In imaging modalities recording diffraction data, the original image can be reconstructed assuming known phases. When phases are unknown, oversampling and a constraint on the support region in the original object can be used to solve a…

Signal Processing · Electrical Eng. & Systems 2018-10-17 Alberto Pietrini , Carl Nettelblad

We develop a novel algorithm for large-scale holographic reconstruction of 3D particle fields. Our method is based on a multiple-scattering beam propagation method (BPM) combined with sparse regularization that enables recovering dense 3D…

Optics · Physics 2021-05-24 Hao Wang , Waleed Tahir , Jiabei Zhu , Lei Tian

3D image processing constitutes nowadays a challenging topic in many scientific fields such as medicine, computational physics and informatics. Therefore, development of suitable tools that guaranty a best treatment is a necessity.…

Numerical Analysis · Computer Science 2018-05-22 Malika Jallouli , Wafa Bel Hadj Khalifa , Anouar Ben Mabrouk , Mohamed Ali Mahjoub

X-ray free-electron lasers (XFELs) are cutting-edge scientific instruments for a wide range of disciplines. Conventionally, the narrow bandwidth is pursued in an XFEL. However, in recent years, the large-bandwidth XFEL operation schemes are…

Accelerator Physics · Physics 2019-02-27 Jiawei Yan , Haixiao Deng

Presented is a novel way to combine snapshot compressive imaging and lateral shearing interferometry in order to capture the spatio-spectral phase of an ultrashort laser pulse in a single shot. A deep unrolling algorithm is utilised for the…

The interest of compressive sampling in ultrasound imaging has been recently extensively evaluated by several research teams. Following the different application setups, it has been shown that the RF data may be reconstructed from a small…

Computer Vision and Pattern Recognition · Computer Science 2015-12-07 Zhouye Chen , Adrian Basarab , Denis Kouamé

In image processing, image segmentation is the process of partitioning a digital image into multiple image segment. Among state-of-the-art methods, Markov Random Fields (MRF) can be used to model dependencies between pixels, and achieve a…

Emerging Technologies · Computer Science 2024-01-05 Timothe Presles , Cyrille Enderli , Gilles Burel , El Houssain Baghious

In diffusion MRI (dMRI), a good sampling scheme is important for efficient acquisition and robust reconstruction. Diffusion weighted signal is normally acquired on single or multiple shells in q-space. Signal samples are typically…

Medical Physics · Physics 2017-09-26 Jian Cheng , Dinggang Shen , Pew-Thian Yap , Peter J. Basser
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