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Related papers: A non-linear subdiffusion model for a cell-cell ad…

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We present a minimal continuum model of strongly adhering cells as active contractile isotropic media and use the model to study the effect of the geometry of the adhesion patch in controlling the spatial distribution of traction and…

Soft Condensed Matter · Physics 2015-06-12 Shiladitya Banerjee , M. Cristina Marchetti

Cell proliferation and diffusion can be modeled through reaction-diffusion systems describing the space-time evolution of a density variable. In this work, we present non-linear transformations of heat equation solutions to model cellular…

Chaotic Dynamics · Physics 2025-06-02 Preet Mishra , Shyam Kumar , Sapna Ratan Shah , R. K. Brojen Singh

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

With this work we investigate the stationary nonequilibrium density matrix of current carrying nonequilibrium steady states of in-between quantum systems that are connected to reservoirs. We describe the analytical procedure to obtain the…

Statistical Mechanics · Physics 2015-05-28 Abhishek Dhar , Keiji Saito , Peter Hanggi

Starting from a particle model describing self-propelled particles interacting through nematic alignment, we derive a macroscopic model for the particle density and mean direction of motion. We first propose a mean-field kinetic model of…

Mathematical Physics · Physics 2019-10-08 Pierre Degond , Sara Merino-Aceituno

Understanding cellular response to mechanical forces is immensely important for a plethora of biological processes. Focal adhesions are multi-molecular protein assemblies that connect the cell to the extracellular matrix and play a pivotal…

Biological Physics · Physics 2019-10-25 Rumi De

We derive a reduced model of solute transport in blood based on the center manifold theory. The derivation is carried out on a convection diffusion equation with general axial and radial velocity profiles in a blood vessel of varying cross…

Fluid Dynamics · Physics 2019-12-23 Rami Masri , Charles Puelz , Beatrice Riviere

In this paper, a class of reaction-diffusion equations for Multiple Sclerosis is presented. These models are derived by means of a diffusive limit starting from a proper kinetic description, taking account of the underlying microscopic…

Quantitative Methods · Quantitative Biology 2026-01-07 Marzia Bisi , Maria Groppi , Giorgio Martalò , Romina Travaglini

We perform the nonlinear stability analysis of a chemotaxis model of bacterial self-organization, assuming that bacteria respond sharply to chemical signals. The resulting discontinuous advection speed represents the key challenge for the…

Analysis of PDEs · Mathematics 2020-09-24 Vincent Calvez , Franca Hoffmann

We present a generic mechanism by which reproducing microorganisms, with a diffusivity that depends on the local population density, can form stable patterns. It is known that a decrease of swimming speed with density can promote separation…

Populations and Evolution · Quantitative Biology 2010-07-13 M. E. Cates , D. Marenduzzo , I. Pagonabarraga , J. Tailleur

The behaviour and fate of tissue cells is controlled by the rigidity and geometry of their adhesive environment, possibly through forces localized to sites of adhesion. We introduce a mechanical model that predicts cellular force…

Cell Behavior · Quantitative Biology 2009-07-24 Ilka B. Bischofs , Sebastian S. Schmidt , Ulrich S. Schwarz

Kinetic-transport equations that take into account the intra-cellular pathways are now considered as the correct description of bacterial chemotaxis by run and tumble. Recent mathematical studies have shown their interest and their…

Analysis of PDEs · Mathematics 2018-06-13 Benoît Perthame , Weiran Sun , Min Tang

In modeling the inflammatory response to a lesion in an artery wall, there are a number of chemotactic mechanisms going on within the wall layer that lead to an arterial plaque. We introduce a rather reduced model of these dynamic…

Analysis of PDEs · Mathematics 2015-11-10 Jonathan Bell , Animikh Biswas

We devise a semi-classical model to describe the transport properties of low-dimensional fermionic lattices under the influence of external quantum stochastic noise. These systems behave as quantum stochastic resistors, where the bulk…

Statistical Mechanics · Physics 2024-06-18 Tony Jin , João Ferreira , Michel Bauer , Michele Filippone , Thierry Giamarchi

Partial differential equation (PDE) models for infectious disease have received renewed interest in recent years. Most models of this type extend classical compartmental formulations with additional terms accounting for spatial dynamics,…

Populations and Evolution · Quantitative Biology 2025-04-29 Pierluigi Colli , Gabriela Marinoschi , Elisabetta Rocca , Alex Viguerie

Living cells are capable of interacting with their environments in a variety of ways, including cell signalling, adhesion, and directed motion. These behaviours are often mediated by receptor molecules embedded in the cell membrane, which…

Biological Physics · Physics 2023-10-17 Hannah Sleath , Bortolo Mognetti , Yuval Elani , Lorenzo Di Michele

We study the transport and deposition dynamics of colloids in saturated porous media under unfavorable filtering conditions. As an alternative to traditional convection-diffusion or more detailed numerical models, we consider a mean-field…

Soft Condensed Matter · Physics 2009-05-13 Hsiang-Ku Lin , Leonid P. Pryadko , Sharon Walker , Roya Zandi

We investigate micro-to-macroscopic derivations in two models of living cells, in presence to cell-cell adhesive interactions. We rigorously address two PDE-based models, one featuring non-local terms and another purely local, as a a result…

Probability · Mathematics 2016-01-21 Mikhail Neklyudov , Dario Trevisan

A fractional diffusion equation with advection term is rigorously derived from a kinetic transport model with a linear turning operator, featuring a fat-tailed equilibrium distribution and a small directional bias due to a given vector…

Analysis of PDEs · Mathematics 2015-10-19 Pedro Aceves-Sanchez , Christian Schmeiser

An approximate method based on adiabatic time dependent density functional theory (TDDFT) is presented, that allows for the description of the electron dynamics in nanoscale junctions under arbitrary time dependent external potentials. In…

Mesoscale and Nanoscale Physics · Physics 2015-05-27 Y. Wang , C. -Y. Yam , G. H. Chen , Th. Frauenheim , T. A. Niehaus