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Identifying and quantifying structural dissimilarities between complex networks is a fundamental and challenging problem in network science. Previous network comparison methods are based on the structural features, such as the length of…

Social and Information Networks · Computer Science 2021-11-29 Zhipeng Wang , Xiu-Xiu Zhan , Chuang Liu , Zi-Ke Zhang

Graph kernels are widely used for measuring the similarity between graphs. Many existing graph kernels, which focus on local patterns within graphs rather than their global properties, suffer from significant structure information loss when…

Machine Learning · Computer Science 2019-12-02 Lingfei Wu , Ian En-Hsu Yen , Zhen Zhang , Kun Xu , Liang Zhao , Xi Peng , Yinglong Xia , Charu Aggarwal

Graph edit distance / similarity is widely used in many tasks, such as graph similarity search, binary function analysis, and graph clustering. However, computing the exact graph edit distance (GED) or maximum common subgraph (MCS) between…

Databases · Computer Science 2020-07-01 Haibo Xiu , Xiao Yan , Xiaoqiang Wang , James Cheng , Lei Cao

In large networks, using the length of shortest paths as the distance measure has shortcomings. A well-studied shortcoming is that extending it to disconnected graphs and directed graphs is controversial. The second shortcoming is that a…

Data Structures and Algorithms · Computer Science 2018-04-03 Mostafa Haghir Chehreghani , Albert Bifet , Talel Abdessalem

Metric learning for classification has been intensively studied over the last decade. The idea is to learn a metric space induced from a normed vector space on which data from different classes are well separated. Different measures of the…

Machine Learning · Computer Science 2019-10-22 Yinan Yu , Tomas McKelvey

Object re-identification method is made up of backbone network, feature aggregation, and loss function. However, most backbone networks lack a special mechanism to handle rich scale variations and mine discriminative feature…

Computer Vision and Pattern Recognition · Computer Science 2022-11-11 Fei Shen , Mengwan Wei , Junchi Ren

We introduce the Information-Estimation Metric (IEM), a novel form of distance function derived from an underlying continuous probability density over a domain of signals. The IEM is rooted in a fundamental relationship between information…

Image and Video Processing · Electrical Eng. & Systems 2026-02-09 Guy Ohayon , Pierre-Etienne H. Fiquet , Florentin Guth , Jona Ballé , Eero P. Simoncelli

Graphs with heterophily have been regarded as challenging scenarios for Graph Neural Networks (GNNs), where nodes are connected with dissimilar neighbors through various patterns. In this paper, we present theoretical understandings of the…

Machine Learning · Computer Science 2024-06-05 Junfu Wang , Yuanfang Guo , Liang Yang , Yunhong Wang

Metrics specifying distances between data points can be learned in a discriminative manner or from generative models. In this paper, we show how to unify generative and discriminative learning of metrics via a kernel learning framework.…

Machine Learning · Computer Science 2011-09-26 Yuan Shi , Yung-Kyun Noh , Fei Sha , Daniel D. Lee

Graph kernel is a powerful tool measuring the similarity between graphs. Most of the existing graph kernels focused on node labels or attributes and ignored graph hierarchical structure information. In order to effectively utilize graph…

Machine Learning · Computer Science 2020-11-03 Kai Ma , Peng Wan , Daoqiang Zhang

Whether comparing networks to each other or to random expectation, measuring dissimilarity is essential to understanding the complex phenomena under study. However, determining the structural dissimilarity between networks is an ill-defined…

Social and Information Networks · Computer Science 2018-07-26 Leo Torres , Pablo Suarez-Serrato , Tina Eliassi-Rad

A new class of distances appropriate for measuring similarity relations between sequences, say one type of similarity per distance, is studied. We propose a new ``normalized information distance'', based on the noncomputable notion of…

Computational Complexity · Computer Science 2011-11-09 Ming Li , Xin Chen , Xin Li , Bin Ma , Paul Vitanyi

Quantifying the differences between networks is a challenging and ever-present problem in network science. In recent years a multitude of diverse, ad hoc solutions to this problem have been introduced. Here we propose that simple and…

Lattice Hamiltonian systems underpin models across condensed matter, nonlinear optics, and biophysics, yet learning their dynamics from data is obstructed by two unknowns: the interaction topology and whether node dynamics are homogeneous.…

Machine Learning · Computer Science 2026-04-28 Ru Geng , Panayotis Kevrekidis , Yixian Gao , Hong-Kun Zhang , Jian Zu

This paper surveys various distance measures for networks and graphs that were introduced in persistent homology. The scope of the paper is limited to network distances that were actually used in brain networks but the methods can be easily…

Quantitative Methods · Quantitative Biology 2017-07-13 Hyekyoung Lee , Zhiwei Ma , Yuan Wang , Moo K. Chung

Comparison of graph structure is a ubiquitous task in data analysis and machine learning, with diverse applications in fields such as neuroscience, cyber security, social network analysis, and bioinformatics, among others. Discovery and…

Applications · Statistics 2023-01-11 Peter Wills , Francois G. Meyer

To improve our understanding of connected systems, different tools derived from statistics, signal processing, information theory and statistical physics have been developed in the last decade. Here, we will focus on the graph comparison…

Physics and Society · Physics 2018-04-23 Johann H. Martínez , Mario Chavez

Most graph kernels are an instance of the class of $\mathcal{R}$-Convolution kernels, which measure the similarity of objects by comparing their substructures. Despite their empirical success, most graph kernels use a naive aggregation of…

Machine Learning · Computer Science 2019-10-31 Matteo Togninalli , Elisabetta Ghisu , Felipe Llinares-López , Bastian Rieck , Karsten Borgwardt

Heterogeneous graphs, which contain nodes and edges of multiple types, are prevalent in various domains, including bibliographic networks, social media, and knowledge graphs. As a fundamental task in analyzing heterogeneous graphs,…

Information Retrieval · Computer Science 2023-05-02 Linhao Luo , Yixiang Fang , Moli Lu , Xin Cao , Xiaofeng Zhang , Wenjie Zhang

How do the neural networks distinguish two images? It is of critical importance to understand the matching mechanism of deep models for developing reliable intelligent systems for many risky visual applications such as surveillance and…

Computer Vision and Pattern Recognition · Computer Science 2021-08-13 Wenliang Zhao , Yongming Rao , Ziyi Wang , Jiwen Lu , Jie Zhou