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Biological data objects often have both of the following features: (i) they are functions rather than single numbers or vectors, and (ii) they are correlated due to phylogenetic relationships. In this paper we give a flexible statistical…

Quantitative Methods · Quantitative Biology 2012-12-20 Nick S. Jones , John Moriarty

We study subliminal learning, a surprising phenomenon where language models transmit behavioral traits via semantically unrelated data. In our main experiments, a "teacher" model with some trait T (such as liking owls or being misaligned)…

Machine Learning · Computer Science 2025-07-22 Alex Cloud , Minh Le , James Chua , Jan Betley , Anna Sztyber-Betley , Jacob Hilton , Samuel Marks , Owain Evans

Transfer learning aims to improve performance on a target task by leveraging information from related source tasks. We propose a nonparametric regression transfer learning framework that explicitly models heterogeneity in the source-target…

Statistics Theory · Mathematics 2026-03-19 Hélène Halconruy , Benjamin Bobbia , Paul Lejamtel

The process of translation is ambiguous, in that there are typically many valid trans- lations for a given sentence. This gives rise to significant variation in parallel cor- pora, however, most current models of machine translation do not…

Machine Learning · Statistics 2018-05-29 Philip Schulz , Wilker Aziz , Trevor Cohn

Electromagnetic radiation plays a crucial role in various physical and chemical processes. Hence, almost all astrophysical simulations require some form of radiative transfer model. Despite many innovations in radiative transfer algorithms…

Instrumentation and Methods for Astrophysics · Physics 2022-12-07 Frederik De Ceuster , Thomas Ceulemans , Jon Cockayne , Leen Decin , Jeremy Yates

Exponential random graph models are an important tool in the statistical analysis of data. However, Bayesian parameter estimation for these models is extremely challenging, since evaluation of the posterior distribution typically involves…

Computation · Statistics 2017-05-05 Lampros Bouranis , Nial Friel , Florian Maire

We aim to learn language models for Creole languages for which large volumes of data are not readily available, and therefore explore the potential transfer from ancestor languages (the 'Ancestry Transfer Hypothesis'). We find that standard…

Computation and Language · Computer Science 2022-06-10 Heather Lent , Emanuele Bugliarello , Anders Søgaard

We present a new model and methods for the posterior drift problem where the regression function in the target domain is modeled as a linear adjustment (on an appropriate scale) of that in the source domain, an idea that inherits the…

Methodology · Statistics 2021-12-14 Subha Maity , Diptavo Dutta , Jonathan Terhorst , Yuekai Sun , Moulinath Banerjee

Despite substantial research efforts evaluating how well large language models~(LLMs) handle global cultural diversity, the mechanisms behind their cultural knowledge acquisition, particularly in multilingual settings, remain unclear. We…

Computation and Language · Computer Science 2025-06-03 Chen Zhang , Zhiyuan Liao , Yansong Feng

Stochastic variational Bayes algorithms have become very popular in the machine learning literature, particularly in the context of nonparametric Bayesian inference. These algorithms replace the true but intractable posterior distribution…

Methodology · Statistics 2024-10-04 Pedro Regueiro , Abel Rodríguez , Juan Sosa

Binary trait data record the presence or absence of distinguishing traits in individuals. We treat the problem of estimating ancestral trees with time depth from binary trait data. Simple analysis of such data is problematic. Each homology…

Methodology · Statistics 2009-08-31 Geoff K. Nicholls , Russell D. Gray

With the emergence of large-scale pre-trained neural networks, methods to adapt such "foundation" models to data-limited downstream tasks have become a necessity. Fine-tuning, preference optimization, and transfer learning have all been…

Machine Learning · Statistics 2025-07-09 Javan Tahir , Surya Ganguli , Grant M. Rotskoff

In transfer learning, we wish to make inference about a target population when we have access to data both from the distribution itself, and from a different but related source distribution. We introduce a flexible framework for transfer…

Machine Learning · Statistics 2021-09-03 Henry W. J. Reeve , Timothy I. Cannings , Richard J. Samworth

Phylogenetic comparative methods are well established tools for using inter-species variation to analyse phenotypic evolution and adaptation. They are generally hampered, however, by predominantly univariate approaches and failure to…

Populations and Evolution · Quantitative Biology 2024-12-13 Krzysztof Bartoszek

Sampling from the posterior is a key technical problem in Bayesian statistics. Rigorous guarantees are difficult to obtain for Markov Chain Monte Carlo algorithms of common use. In this paper, we study an alternative class of algorithms…

Statistics Theory · Mathematics 2024-08-26 Andrea Montanari , Yuchen Wu

Plant phenotyping (Guo et al. 2021; Pieruschka et al. 2019) focuses on studying the diverse traits of plants related to the plants' growth. To be more specific, by accurately measuring the plant's anatomical, ontogenetical, physiological…

Machine Learning · Computer Science 2022-01-17 Jun Wu , Elizabeth A. Ainsworth , Sheng Wang , Kaiyu Guan , Jingrui He

A wide variety of transition-based algorithms are currently used for dependency parsers. Empirical studies have shown that performance varies across different treebanks in such a way that one algorithm outperforms another on one treebank…

Computation and Language · Computer Science 2020-04-01 Mark Anderson , Carlos Gómez-Rodríguez

We propose a model of the evolution of a matrix along a phylogenetic tree, in which transformations affect either entire rows or columns of the matrix. This represents the change of both lexical and phonological aspects of linguistic data,…

Populations and Evolution · Quantitative Biology 2022-06-28 Grégoire Clarté , Robin J. Ryder

In this paper, we extend the transfer learning classification framework from regression function-based methods to decision rules. We propose a novel methodology for modeling posterior drift through Bayes decision rules. By exploiting the…

Machine Learning · Statistics 2025-08-29 Xiaohan Wang , Yang Ning

The adaptation of biological species to their environment depends on their traits. When various biological processes occur (survival, reproduction, migration, etc.), the trait distribution may change with respect to time and space. In the…

Analysis of PDEs · Mathematics 2021-05-07 Léonard Dekens , Florian Lavigne