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We present a new numerical approach that is able to solve the multi-dimensional radiative transfer equations in all opacity regimes on a Lagrangian, unstructured network of characteristics based on a stochastic point process. Our method…

Astrophysics · Physics 2007-05-23 Jelle Ritzerveld , Vincent Icke , Erik-Jan Rijkhorst

We provide a general formula, based on stochastic thermodynamics, that describes the flow of information between an arbitrary number of coupled complex-valued Langevin equations. This permits to describe the transfer of information in…

Statistical Mechanics · Physics 2020-04-09 Simone Borlenghi

Redundancy of experimental data is the basic statistic from which the complexity of a natural phenomenon and the proper number of experiments needed for its exploration can be estimated. The redundancy is expressed by the entropy of…

Data Analysis, Statistics and Probability · Physics 2007-10-10 I. Grabec

Multielectrode arrays allow recording of the activity of many single neurons, from which correlations can be calculated. The functional roles of correlations can be revealed by the measures of the information conveyed by neuronal activity;…

Statistical Mechanics · Physics 2009-09-25 Michele Bezzi , Mathew E. Diamond , Alessandro Treves

We lay a comprehensive foundation for the study of redundant information storage in decoherence processes. Redundancy has been proposed as a prerequisite for objectivity, the defining property of classical objects. We consider two ensembles…

Quantum Physics · Physics 2009-11-11 Robin Blume-Kohout , W. H. Zurek

This article introduces a model-agnostic approach to study statistical synergy, a form of emergence in which patterns at large scales are not traceable from lower scales. Our framework leverages various multivariate extensions of Shannon's…

Information Theory · Computer Science 2019-09-18 Fernando Rosas , Pedro A. M. Mediano , Michael Gastpar , Henrik J. Jensen

Message passing neural networks iteratively generate node embeddings by aggregating information from neighboring nodes. With increasing depth, information from more distant nodes is included. However, node embeddings may be unable to…

Machine Learning · Computer Science 2024-03-29 Franka Bause , Samir Moustafa , Johannes Langguth , Wilfried N. Gansterer , Nils M. Kriege

Network cascade refers to diffusion processes in which outcome changes within part of an interconnected population trigger a sequence of changes across the entire network. These cascades are governed by underlying diffusion networks, which…

Social and Information Networks · Computer Science 2025-06-25 Yubai Yuan , Siyu Huang , Abdul Basit Adeel

Cellular signaling networks have evolved to cope with intrinsic fluctuations, coming from the small numbers of constituents, and the environmental noise. Stochastic chemical kinetics equations govern the way biochemical networks process…

Quantitative Methods · Quantitative Biology 2009-11-13 Yueheng Lan , Peter G. Wolynes , Garegin A. Papoian

We present a stochastic formalism for signal transduction processes in bacterial two-component system. Using elementary mass action kinetics, the proposed model takes care of signal transduction in terms of phosphotransfer mechanism between…

Subcellular Processes · Quantitative Biology 2014-03-26 Alok Kumar Maity , Arnab Bandyopadhyay , Pinaki Chaudhury , Suman K Banik

Distributed computation in artificial life and complex systems is often described in terms of component operations on information: information storage, transfer and modification. Information modification remains poorly described however,…

Information Theory · Computer Science 2013-10-10 Joseph T. Lizier , Benjamin Flecker , Paul L. Williams

Cellular decision making is based on regulatory circuits that associate signal thresholds to specific physiological actions. This transmission of information is subjected to molecular noise what can decrease its fidelity. Here, we show…

Molecular Networks · Quantitative Biology 2017-02-08 Guillermo Rodrigo , Juan F. Poyatos

Markov chains are fundamental models for stochastic dynamics, with applications in a wide range of areas such as population dynamics, queueing systems, reinforcement learning, and Monte Carlo methods. Estimating the transition matrix and…

Statistics Theory · Mathematics 2026-01-26 Lasse Leskelä , Maximilien Dreveton

Redundancy mechanisms consist in sending several copies of a same job to a subset of servers. It constitutes one of the most promising ways to exploit diversity in multiservers applications. However, its pros and cons are still not…

Performance · Computer Science 2021-03-22 Elene Anton , Urtzi Ayesta , Matthieu Jonckheere , Ina Maria Verloop

Biochemical signal transduction, a form of molecular communication, can be modeled using graphical Markov channels with input-modulated transition rates. Such channel models are strongly non-Gaussian. In this paper we use a linear noise…

Quantitative Methods · Quantitative Biology 2019-08-30 Gregory R. Hessler , Andrew W. Eckford , Peter J. Thomas

Noisy saltatory spike propagation along myelinated axons is studied within a stochastic Hodgkin-Huxley model. The intrinsic noise (whose strength is inverse proportional to the nodal membrane size) arising from fluctuations of the number of…

Biological Physics · Physics 2010-09-01 Yunyun Li , Gerhard Schmid , Peter Hanggi

The information shared among observables representing processes of interest is traditionally evaluated in terms of macroscale measures characterizing aggregate properties of the underlying processes and their interactions. Traditional…

Information Theory · Computer Science 2018-01-31 Rui A. P. Perdigão

Queue networks describe complex stochastic systems of both theoretical and practical interest. They provide the means to assess alterations, diagnose poor performance and evaluate robustness across sets of interconnected resources. In the…

Computation · Statistics 2017-11-02 Iker Perez , David Hodge , Theodore Kypraios

In this paper, we introduce a nonlinear stochastic model to describe the propagation of information inside a computer processor. In this model, a computational task is divided into stages, and information can flow from one stage to another.…

Probability · Mathematics 2024-11-26 Mohammad Daneshvar , Richard C. Barnard , Cory Hauck , Ilya Timofeyev

We present a theoretical formalism to study steady state information transmission in type 1 coherent feed-forward loop motif with an additive signal integration mechanism. Our construct allows a two-step cascade to be slowly transformed…

Molecular Networks · Quantitative Biology 2020-02-19 Md Sorique Aziz Momin , Ayan Biswas , Suman K Banik