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We define and study the link prediction problem in bipartite networks, specializing general link prediction algorithms to the bipartite case. In a graph, a link prediction function of two vertices denotes the similarity or proximity of the…

Machine Learning · Computer Science 2010-07-27 Jérôme Kunegis , Ernesto W. De Luca , Sahin Albayrak

Given a graph $Y$ on $n$ vertices and a desired level of fault-tolerance $k$, an objective in fault-tolerant system design is to construct a supergraph $X$ on $n + k$ vertices such that the removal of any $k$ nodes from $X$ leaves a graph…

Discrete Mathematics · Computer Science 2017-09-26 Ashwin Ganesan

An important problem in the field of graph signal processing is developing appropriate overcomplete dictionaries for signals defined on different families of graphs. The Cayley graph of the symmetric group has natural applications in ranked…

Signal Processing · Electrical Eng. & Systems 2022-03-08 Kathryn Beck , Mahya Ghandehari

Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…

Machine Learning · Computer Science 2019-10-08 Yu Tian , Long Zhao , Xi Peng , Dimitris N. Metaxas

Constructing the adjacency graph is fundamental to graph-based clustering. Graph learning in kernel space has shown impressive performance on a number of benchmark data sets. However, its performance is largely determined by the chosen…

Machine Learning · Computer Science 2019-03-15 Zhao Kang , Liangjian Wen , Wenyu Chen , Zenglin Xu

We present a unified framework to study graph kernels, special cases of which include the random walk graph kernel \citep{GaeFlaWro03,BorOngSchVisetal05}, marginalized graph kernel \citep{KasTsuIno03,KasTsuIno04,MahUedAkuPeretal04}, and…

Machine Learning · Computer Science 2010-11-30 S. V. N. Vishwanathan , Karsten M. Borgwardt , Imre Risi Kondor , Nicol N. Schraudolph

We introduce a new model of indeterminacy in graphs: instead of specifying all the edges of the graph, the input contains all triples of vertices that form a connected subgraph. In general, different (labelled) graphs may have the same set…

Discrete Mathematics · Computer Science 2023-03-14 Paul Bastide , Linda Cook , Jeff Erickson , Carla Groenland , Marc van Kreveld , Isja Mannens , Jordi L. Vermeulen

The existence of a polynomial kernel for Odd Cycle Transversal was a notorious open problem in parameterized complexity. Recently, this was settled by the present authors (Kratsch and Wahlstr\"om, SODA 2012), with a randomized polynomial…

Data Structures and Algorithms · Computer Science 2015-03-19 Stefan Kratsch , Magnus Wahlström

The purpose of this paper is to analyze the Moore-Penrose pseudo-inversion of symmetric real matrices with application in the graph theory. We introduce a novel concept of positively and negatively pseudo-inverse matrices and graphs. We…

Spectral Theory · Mathematics 2023-02-03 Sona Pavlikova , Daniel Sevcovic

We say A is a quasi-normal subgroup of the group G if the commensurator of A in G is all of G. We develop geometric versions of commensurators in finitely generated groups. In particular, g is an element of the commensurator of A in G iff…

Group Theory · Mathematics 2009-12-31 Gregory R. Conner , Michael L. Mihalik

This paper addresses the problem of synchronizing orthogonal matrices over directed graphs. For synchronized transformations (or matrices), composite transformations over loops equal the identity. We formulate the synchronization problem as…

Optimization and Control · Mathematics 2017-04-10 Johan Thunberg , Florian Bernard , Jorge Goncalves

We show that the degree distributions of graphs do not suffice to characterize the synchronization of systems evolving on them. We prove that, for any given degree sequence satisfying certain conditions, there exists a connected graph…

Adaptation and Self-Organizing Systems · Physics 2007-08-30 Fatihcan M. Atay , Tuerker Biyikoglu , Juergen Jost

Given a hypergraph $H = (V,E)$, what is the smallest subset $X \subseteq V$ such that $e \cap X \neq \emptyset$ holds for all $e \in E$? This problem, known as the hitting set problem, is a basic problem in parameterized complexity theory.…

Computational Complexity · Computer Science 2018-01-03 Max Bannach , Till Tantau

It is well-known that the graph isomorphism problem can be posed as an equivalent problem of determining whether an auxiliary graph structure contains a clique of specific order. However, the algorithms that have been developed so far for…

Data Structures and Algorithms · Computer Science 2019-10-29 Giannis Nikolentzos , Michalis Vazirgiannis

We study semigroups of convex monotone operators on spaces of continuous functions and their behaviour with respect to $\Gamma$-convergence. In contrast to the linear theory, the domain of the generator is, in general, not invariant under…

Analysis of PDEs · Mathematics 2025-04-28 Jonas Blessing , Robert Denk , Michael Kupper , Max Nendel

The subgraph-subgraph matching problem is, given a pair of graphs and a positive integer $K$, to find $K$ vertices in the first graph, $K$ vertices in the second graph, and a bijection between them, so as to minimize the number of adjacency…

Optimization and Control · Mathematics 2025-08-08 Lingyao Meng , Mengqi Lou , Jianyu Lin , Vince Lyzinski , Donniell E. Fishkind

As an appropriate generalisation of the features of the classical (Schein) theory of representations of inverse semigroups in $\mathscr{I}_{X}$, a theory of representations of inverse semigroups by homomorphisms into complete atomistic…

Group Theory · Mathematics 2021-02-22 D. G. FitzGerald

We study the two inference problems of detecting and recovering an isolated community of \emph{general} structure planted in a random graph. The detection problem is formalized as a hypothesis testing problem, where under the null…

Data Structures and Algorithms · Computer Science 2022-01-25 Wasim Huleihel

We introduce the first graph kernels for metric graphs via tropical algebraic geometry. In contrast to conventional graph kernels based on graph combinatorics such as nodes, edges, and subgraphs, our metric graph kernels are purely based on…

Machine Learning · Computer Science 2026-01-30 Yueqi Cao , Anthea Monod

The Fundamental Morphism Theorem is a categorical version of the First Noether Isomorphism Theorem for categories that do not have kernels or cokernels. We consider two categories of graphs. Both categories will admit graphs with multiple…

Combinatorics · Mathematics 2018-08-31 Tien Chih , Demitri Plessas