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Phylogenetic trees canonically arise as embeddings of phylogenetic networks. We recently showed that the problem of deciding if two phylogenetic networks embed the same sets of phylogenetic trees is computationally hard, \blue{in…

Combinatorics · Mathematics 2021-04-13 Janosch Doecker , Simone Linz , Charles Semple

In order to prove that the P of problems is different to the NP class, we consider the satisfability problem of propositional calculus formulae, which is an NP-complete problem. It is shown that, for every search algorithm A, there is a set…

Computational Complexity · Computer Science 2007-11-09 Alfredo von Reckow

A frequently studied performance measure in online optimization is competitive analysis. It corresponds to the worst-case ratio, over all possible inputs of an algorithm, between the performance of the algorithm and the optimal offline…

Optimization and Control · Mathematics 2024-05-30 Antoine Lhomme , Nicolas Catusse , Nadia Brauner

A principled approach to understand network structures is to formulate generative models. Given a collection of models, however, an outstanding key task is to determine which one provides a more accurate description of the network at hand,…

Machine Learning · Statistics 2018-06-29 Toni Vallès-Català , Tiago P. Peixoto , Roger Guimerà , Marta Sales-Pardo

The growing amount of applications that generate vast amount of data in short time scales render the problem of partial monitoring, coupled with prediction, a rather fundamental one. We study the aforementioned canonical problem under the…

Data Structures and Algorithms · Computer Science 2016-08-02 Michalis Kallitsis , Stilian Stoev , George Michailidis

We propose a fast, parallel maximum clique algorithm for large sparse graphs that is designed to exploit characteristics of social and information networks. The method exhibits a roughly linear runtime scaling over real-world networks…

Social and Information Networks · Computer Science 2013-12-30 Ryan A. Rossi , David F. Gleich , Assefaw H. Gebremedhin , Md. Mostofa Ali Patwary

We investigate the generalisation of quantum search of unstructured and totally ordered sets to search of partially ordered sets (posets). Two models for poset search are considered. In both models, we show that quantum algorithms can…

Quantum Physics · Physics 2009-06-18 Ashley Montanaro

Several algorithms have been proposed to compute partitions of networks into communities that score high on a graph clustering index called modularity. While publications on these algorithms typically contain experimental evaluations to…

Data Analysis, Statistics and Probability · Physics 2007-05-23 U. Brandes , D. Delling , M. Gaertler , R. Goerke , M. Hoefer , Z. Nikoloski , D. Wagner

We propose an approach based on analysis of cost-quality tradeoffs for comparison of efficiency of various algorithms for small-world network construction. A number of both known in the literature and original algorithms for complex…

Social and Information Networks · Computer Science 2014-02-18 A. Demichev , V. Ilyin , A. Kryukov , S. Polyakov

Top-down induction of decision trees has been observed to suffer from the inadequate functioning of the pruning phase. In particular, it is known that the size of the resulting tree grows linearly with the sample size, even though the…

Artificial Intelligence · Computer Science 2011-06-06 T. Elomaa , M. Kaariainen

We revisit the selection problem, namely that of computing the $i$th order statistic of $n$ given elements, in particular the classic deterministic algorithm by grouping and partition due to Blum, Floyd, Pratt, Rivest, and Tarjan (1973).…

Data Structures and Algorithms · Computer Science 2019-04-09 Ke Chen , Adrian Dumitrescu

We consider a variant of treewidth that we call clique-partitioned treewidth in which each bag is partitioned into cliques. This is motivated by the recent development of FPT-algorithms based on similar parameters for various problems. With…

Data Structures and Algorithms · Computer Science 2023-02-20 Thomas Bläsius , Maximilian Katzmann , Marcus Wilhelm

We study a maximization problem for geometric network design. Given a set of $n$ compact neighborhoods in $\mathbb{R}^d$, select a point in each neighborhood, so that the longest spanning tree on these points (as vertices) has maximum…

Computational Geometry · Computer Science 2020-04-30 Ke Chen , Adrian Dumitrescu

Network compression is crucial to making the deep networks to be more efficient, faster, and generalizable to low-end hardware. Current network compression methods have two open problems: first, there lacks a theoretical framework to…

Machine Learning · Computer Science 2022-06-09 Ziqi Zhou , Li Lian , Yilong Yin , Ze Wang

We explore the fundamental problem of sorting through the lens of learning-augmented algorithms, where algorithms can leverage possibly erroneous predictions to improve their efficiency. We consider two different settings: In the first…

Data Structures and Algorithms · Computer Science 2023-11-03 Xingjian Bai , Christian Coester

The authors recently gave an $n^{O(\log\log n)}$ time membership query algorithm for properly learning decision trees under the uniform distribution (Blanc et al., 2021). The previous fastest algorithm for this problem ran in $n^{O(\log…

Data Structures and Algorithms · Computer Science 2022-06-30 Guy Blanc , Jane Lange , Mingda Qiao , Li-Yang Tan

Online algorithm is a well-known computational model. We introduce quantum online algorithms and investigate them with respect to a competitive ratio in two points of view: space complexity and advice complexity. We start with exploring a…

Computational Complexity · Computer Science 2017-09-26 Kamil Khadiev , Aliya Khadieva , Ilnaz Mannapov

We present a simple $O(n^4)$-time algorithm for computing optimal search trees with two-way comparisons. The only previous solution to this problem, by Anderson et al., has the same running time, but is significantly more complicated and is…

Data Structures and Algorithms · Computer Science 2022-02-14 Marek Chrobak , Mordecai Golin , J. Ian Munro , Neal E. Young

Atomic congestion games are a classic topic in network design, routing, and algorithmic game theory, and are capable of modeling congestion and flow optimization tasks in various application areas. While both the price of anarchy for such…

Computer Science and Game Theory · Computer Science 2024-10-23 Cornelius Brand , Robert Ganian , Subrahmanyam Kalyanasundaram , Fionn Mc Inerney

We consider the problem of constructing optimal decision trees: given a collection of tests which can disambiguate between a set of $m$ possible diseases, each test having a cost, and the a-priori likelihood of the patient having any…

Data Structures and Algorithms · Computer Science 2017-04-24 Anupam Gupta , Viswanath Nagarajan , R. Ravi