Related papers: Similarity-First Search: a new algorithm with appl…
Robinsonian matrices arise in the classical seriation problem and play an important role in many applications where unsorted similarity (or dissimilarity) information must be reordered. We present a new polynomial time algorithm to…
There has been a rise in the popularity of algebraic methods for graph algorithms given the development of the GraphBLAS library and other sparse matrix methods. An exemplar for these approaches is Breadth-First Search (BFS). The algebraic…
A symmetric matrix is Robinsonian if its rows and columns can be simultaneously reordered in such a way that entries are monotone nondecreasing in rows and columns when moving toward the diagonal. The adjacency matrix of a graph is…
This note recapitulates an algorithmic observation for ordered Depth-First Search (DFS) in directed graphs that immediately leads to a parallel algorithm with linear speed-up for a range of processors for non-sparse graphs. The note extends…
Graph searching is one of the simplest and most widely used tools in graph algorithms. Every graph search method is defined using some particular selection rule, and the analysis of the corresponding vertex orderings can aid greatly in…
The Breadth-First Search (BFS) algorithm is an important building block for graph analysis of large datasets. The BFS parallelisation has been shown to be challenging because of its inherent characteristics, including irregular memory…
The Breadth First Search (BFS) algorithm is the foundation and building block of many higher graph-based operations such as spanning trees, shortest paths and betweenness centrality. The importance of this algorithm increases each day due…
There are numerous NP-hard combinatorial problems which involve searching for an undirected graph satisfying a certain property. One way to solve such problems is to translate a problem into an instance of the boolean satisfiability (SAT)…
A Robinson similarity matrix is a symmetric matrix where the entry values on all rows and columns increase toward the diagonal. Decompose the Robinson matrix into the sum of k {0, 1}-matrices, then these k {0, 1}-matrices are the adjacency…
To find a shortest path between two nodes $s_0$ and $s_1$ in a given graph, a classical approach is to start a Breadth-First Search (BFS) from $s_0$ and run it until the search discovers $s_1$. Alternatively, one can start two Breadth-First…
A matrix is incomplete when some of its entries are missing. A Robinson incomplete symmetric matrix is an incomplete symmetric matrix whose non-missing entries do not decrease along rows and columns when moving toward the diagonal. A…
It is well-known since the seventies of last century that Depth First Search (DFS) can be used to compute strongly connected components [RE. Tarjan. SIAM Journal on Computing, 1972] and Breadth First Search (BFS) can be used to compute…
This study develops a graph search algorithm to find the optimal discrimination path for the binary classification problem. The objective function is defined as the difference of variations between the true positive (TP) and false positive…
A square symmetric matrix is a Robinson similarity matrix if entries in its rows and columns are non-decreasing when moving towards the diagonal. A Robinson similarity matrix can be viewed as the affinity matrix between objects arranged in…
We present a work-efficient parallel level-synchronous Breadth First Search (BFS) algorithm for shared-memory architectures which achieves the theoretical lower bound on parallel running time. The optimality holds regardless of the shape of…
Lexicographic depth first search (LexDFS) is a graph search protocol which has already proved to be a powerful tool on cocomparability graphs. Cocomparability graphs have been well studied by investigating their complements (comparability…
Data-intensive, graph-based computations are pervasive in several scientific applications, and are known to to be quite challenging to implement on distributed memory systems. In this work, we explore the design space of parallel algorithms…
Breadth-first search (BFS) is a fundamental graph algorithm that presents significant challenges for parallel implementation due to irregular memory access patterns, load imbalance and synchronization overhead. In this paper, we introduce a…
In this paper, we propose a depth-first search (DFS) algorithm for searching maximum matchings in general graphs. Unlike blossom shrinking algorithms, which store all possible alternative alternating paths in the super-vertices shrunk from…
A robot finds it really hard to learn creatively and adapt to new unseen challenges. This is mainly because of the minimal information it has access to or experience towards. Paulius et al. [1] presented a way to construct functional graphs…