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We give an $O(n^2(k+\log n))$ algorithm for computing the $k$-dimensional persistent homology of a filtration of clique complexes of cyclic graphs on $n$ vertices. This is nearly quadratic in the number of vertices $n$, and therefore a…

Computational Geometry · Computer Science 2019-10-15 Henry Adams , Ethan Coldren , Sean Willmot

The \v{C}ech complex is one of the most widely used tools in applied algebraic topology. Unfortunately, due to the inclusive nature of the \v{C}ech filtration, the number of simplices grows exponentially in the number of input points. A…

Algebraic Topology · Mathematics 2015-01-12 Magnus Bakke Botnan , Gard Spreemann

Computing Persistent Homology for large point clouds remains a bottleneck for the wider adoption of persistent homology by the scientific community. We present an algorithm which can compute the degree-1 Vietoris-Rips Persistent Homology of…

Algebraic Topology · Mathematics 2024-09-13 Musashi Ayrton Koyama , Facundo Memoli , Vanessa Robins , Katharine Turner

Manifold reconstruction has been extensively studied for the last decade or so, especially in two and three dimensions. Recently, significant improvements were made in higher dimensions, leading to new methods to reconstruct large classes…

Computational Geometry · Computer Science 2007-12-18 Frédéric Chazal , Steve Oudot

We consider the classic Set Cover problem in the data stream model. For $n$ elements and $m$ sets ($m\geq n$) we give a $O(1/\delta)$-pass algorithm with a strongly sub-linear $\tilde{O}(mn^{\delta})$ space and logarithmic approximation…

Data Structures and Algorithms · Computer Science 2016-05-03 Sariel Har-Peled , Piotr Indyk , Sepideh Mahabadi , Ali Vakilian

In a recent breakthrough, Paz and Schwartzman (SODA'17) presented a single-pass ($2+\epsilon$)-approximation algorithm for the maximum weight matching problem in the semi-streaming model. Their algorithm uses $O(n\log^2 n)$ bits of space,…

Data Structures and Algorithms · Computer Science 2019-01-01 Mohsen Ghaffari , David Wajc

We develop novel methods for using persistent homology to infer the homology of an unknown Riemannian manifold $(M, g)$ from a point cloud sampled from an arbitrary smooth probability density function. Standard distance-based filtered…

Computational Geometry · Computer Science 2022-01-07 Abigail Hickok

Persistent homology has emerged as a novel tool for data analysis in the past two decades. However, there are still very few shapes or even manifolds whose persistent homology barcodes (say of the Vietoris-Rips complex) are fully known.…

Metric Geometry · Mathematics 2018-07-31 Henry Adams , Samir Chowdhury , Adam Quinn Jaffe , Bonginkosi Sibanda

We study the problem of $2$-dimensional orthogonal range counting with additive error. Given a set $P$ of $n$ points drawn from an $n\times n$ grid and an error parameter $\eps$, the goal is to build a data structure, such that for any…

Data Structures and Algorithms · Computer Science 2016-05-24 Zhewei Wei , Ke Yi

We initiate the study of persistent homology of random geometric simplicial complexes. Our main interest is in maximally persistent cycles of degree-$k$ in persistent homology, for a either the \cech or the Vietoris--Rips filtration built…

Probability · Mathematics 2016-05-17 Omer Bobrowski , Matthew Kahle , Primoz Skraba

Consider a Poisson point process within a convex set in a Euclidean space. The Vietoris-Rips complex is the clique complex over the graph connecting all pairs of points with distance at most $\delta$. Summing powers of the volume of all…

Probability · Mathematics 2019-12-03 G. Akinwande , M. Reitzner

The long computational time and large memory requirements for computing Vietoris Rips persistent homology from point clouds remains a significant deterrent to its application to big data. This paper aims to reduce the memory footprint of…

Algebraic Topology · Mathematics 2024-12-12 Musashi Ayrton Koyama , Vanessa Robins , Katharine Turner

We study density thresholds that force a measurable set $E\subseteq\mathbb{R}^d$ to contain all sufficiently large similar copies of every $n$-point configuration. We prove a lower bound of the form $1-O((\log n)/n)$, which matches the…

Classical Analysis and ODEs · Mathematics 2026-04-21 Vjekoslav Kovač , Adian Anibal Santos Sepčić

In this paper, we present an algorithm to compute the filtered generalized \v{C}ech complex for a finite collection of disks in the plane, which don't necessarily have the same radius. The key step behind the algorithm is to calculate the…

Computational Geometry · Computer Science 2019-04-15 Jesus F. Espinoza , Rosalia Hernandez-Amador , Hector A. Hernandez , Beatriz Ramonetti-Valencia

Consider a set P of N random points on the unit sphere of dimension $d-1$, and the symmetrized set S = P union (-P). The halving polyhedron of S is defined as the convex hull of the set of centroids of N distinct points in S. We prove that…

Computational Geometry · Computer Science 2014-04-25 Quentin Mérigot

Given a finite set of points $P \subseteq \mathbb{R}^d$, we would like to find a small subset $S \subseteq P$ such that the convex hull of $S$ approximately contains $P$. More formally, every point in $P$ is within distance $\epsilon$ from…

Computational Geometry · Computer Science 2017-12-15 Avrim Blum , Vladimir Braverman , Ananya Kumar , Harry Lang , Lin F. Yang

For a finite set of balls of radius $r$, the $k$-fold cover is the space covered by at least $k$ balls. Fixing the ball centers and varying the radius, we obtain a nested sequence of spaces that is called the $k$-fold filtration of the…

Computational Geometry · Computer Science 2023-05-18 Mickaël Buchet , Bianca B. Dornelas , Michael Kerber

We provide an O(log log OPT)-approximation algorithm for the problem of guarding a simple polygon with guards on the perimeter. We first design a polynomial-time algorithm for building epsilon-nets of size O(1/epsilon log log 1/epsilon) for…

Computational Geometry · Computer Science 2010-01-26 James King , David Kirkpatrick

We define a new framework that unifies the filtration and mapper approaches from TDA, and present efficient algorithms to compute it. Termed the box filtration of a PCD, we grow boxes (hyperrectangles) that are not necessarily centered at…

Computational Geometry · Computer Science 2025-10-10 Enrique Alvarado , Prashant Gupta , Bala Krishnamoorthy

We study combinatorial connectivity for two models of random geometric complexes. These two models - \v{C}ech and Vietoris-Rips complexes - are built on a homogeneous Poisson point process of intensity $n$ on a $d$-dimensional torus using…

Probability · Mathematics 2018-02-23 Srikanth K. Iyer , D. Yogeshwaran