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Biofilms are complex, self-organized consortia of microorganisms that produce a functional, protective matrix of biomolecules. Physically, the structure of a biofilm can be described as an entangled polymer network which grows and changes…

Biological Physics · Physics 2016-11-08 Marco G. Mazza

Given a graph or a matroid, a tree of tangles is a tree decomposition that displays the structure of the connectivity: every edge of the decomposition tree induces a separation, that is, a way to divide the graph or matroid into two parts;…

Combinatorics · Mathematics 2023-02-06 Ann-Kathrin Elm

We construct a smooth codimension-one foliation on the five-sphere in which every leaf is a symplectic four-manifold and such that the symplectic structure varies smoothly. Our construction implies the existence of a complete regular…

Symplectic Geometry · Mathematics 2020-01-21 Pablo Suárez-Serrato , Alberto Verjovsky

We describe Galois connections which arise between two kinds of combinatorial structures, both of which generalize trees with labelled leaves, and then apply those connections to a family of polytopes. The graphs we study can be imbued with…

Combinatorics · Mathematics 2020-07-27 Stefan Forcey , Drew Scalzo

In complex systems, groups of interacting objects may form prevalent and persistent spatiotemporal patterns, which we refer to as motifs. These motifs can exhibit features that reveal how individual objects interact with one another.…

Biological Physics · Physics 2025-12-12 Ying Chen Lim , Rakesh Das , Tetsuya Hiraiwa , N. Duane Loh

This study investigates the three-dimensional organisation and evolution of stall cells in the separated flow region over an airfoil. Using a hybrid RANS/LES approach based on the DDES-SST turbulence model, we characterise the formation and…

Fluid Dynamics · Physics 2026-02-11 Rishabh Mishra , Emmanuel Guilmineau , Ingrid Neunaber , Caroline Braud

Natural slender structures, such as plant leaves, petals, and tendrils, often exhibit complex three-dimensional (3D) morphologies-including twisting, helical coiling, and saddle-bending-driven by differential growth. The resulting internal…

Soft Condensed Matter · Physics 2025-06-24 Hao Liu , Mingwu Li , Dabiao Liu

The hierarchical structure of the butterfly fractal -- the Hofstader butterfly, is found to be described by an octonary tree. In this framework of building the butterfly graph, every iteration generates sextuplets of butterflies, each with…

General Mathematics · Mathematics 2024-06-04 Indubala I Satija

A network's topology information can be given as an adjacency matrix. The bitmap of sorted adjacency matrix(BOSAM) is a network visualisation tool which can emphasise different network structures by just looking at reordered adjacent…

Physics and Society · Physics 2015-05-13 Yuchun Guo , Changjia Chen , Shi Zhou

We review the model of the Voronoi Diagrams which allows to reproduce the large-scale structures of our universe as given by the astronomical catalogs. The observed number of galaxies in a given solid angle with a chosen flux/magnitude…

Cosmology and Nongalactic Astrophysics · Physics 2013-09-03 L. Zaninetti

Twisted and rope-like assemblies of filamentous molecules are common and vital structural elements in cells and tissue of living organisms. We study the intrinsic frustration occurring in these materials between the two-dimensional…

Soft Condensed Matter · Physics 2015-06-03 Amir Azadi , Gregory M. Grason

In computer simulations of dry foams and of epithelial tissues, vertex models are often used to describe the shape and motion of individual cells. Although these models have been widely adopted, relatively little is known about their basic…

Tissues and Organs · Quantitative Biology 2016-09-29 Meryl A. Spencer , Zahera Jabeen , David K. Lubensky

A review on the properties and dynamical origin and nature of the cosmic foam, the tenuous space-filling frothy network permeating the interior of the Universe. We discuss the properties of this striking and intriguing pattern, describing…

Astrophysics · Physics 2007-05-23 Rien van de Weygaert

Tubular lattices are ubiquitous in nature and technology. Microtubules and nanotubes of all kinds act as important pillars of biological cells and the man-made nano-world. We show that when prestress is introduced in such structures,…

Soft Condensed Matter · Physics 2013-12-12 Osman Kahraman , Hervé Mohrbach , Martin Michael Müller , Igor M. Kulić

Since Charles Darwin's time, the study of climbing plants on a cylindrical stake has been the subject of numerous articles in plant biology. One of the main ideas for studying the coiling of an elastic plant stem is to consider the growth…

Biological Physics · Physics 2025-07-22 Henri Gouin

Three-dimensional cultures of cells are gaining popularity as an in vitro improvement over 2D Petri dishes. In many such experiments, cells have been found to organize in aggregates. We present new results of three-dimensional in vitro…

Cell Behavior · Quantitative Biology 2018-11-01 Federica Bubba , Camille Pouchol , Nathalie Ferrand , Guillaume Vidal , Luis Almeida , Benoıt Perthame , Michèle Sabbah

The sunflower equation describes the motion of the tip of a plant due to the auxin transportation under the influence of gravity. This work proposes the fractional-order generalization to this delay differential equation. The equation…

Dynamical Systems · Mathematics 2024-07-04 Deepa Gupta , Sachin Bhalekar

The classic Voronoi cells can be generalized to a higher-order version by considering the cells of points for which a given $k$-element subset of the set of sites consists of the $k$ closest sites. We study the structure of the $k$-order…

Metric Geometry · Mathematics 2019-06-14 Juan Enrique Martínez-Legaz , Vera Roshchina , Maxim Todorov

Topological quantum matter exhibits a range of exotic phenomena when enriched by subdimensional symmetries. This includes new features beyond those that appear in the conventional setting of global symmetry enrichment. A recently discovered…

Strongly Correlated Electrons · Physics 2025-05-07 Po-Shen Hsin , David T. Stephen , Arpit Dua , Dominic J. Williamson

Chemotaxis receptors in E. coli form clusters at the cell poles and also laterally along the cell body, and this clustering plays an important role in signal transduction. Recently, experiments using flourrescence imaging have shown that,…

Statistical Mechanics · Physics 2008-11-29 Hui Wang , Ned S. Wingreen , Ranjan Mukhopadhyay
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