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In order to manage massive graphs in practice, it is often necessary to resort to graph compression, which aims at reducing the memory used when storing and processing the graph. Efficient compression methods have been proposed in the…

Social and Information Networks · Computer Science 2023-01-12 Maximilien Danisch , Ioannis Panagiotas , Lionel Tabourier

The Vertex Separator Problem for a graph is to find the smallest collection of vertices whose removal breaks the graph into two disconnected subsets that satisfy specified size constraints. In the paper 10.1016/j.ejor.2014.05.042, the…

Data Structures and Algorithms · Computer Science 2016-07-19 William W. Hager , James T. Hungerford , Ilya Safro

Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the…

Machine Learning · Computer Science 2019-05-22 Zhao Kang , Honghui Xu , Boyu Wang , Hongyuan Zhu , Zenglin Xu

We study a graph partitioning problem motivated by the simulation of the physical movement of multi-body systems on an atomistic level, where the forces are calculated from a quantum mechanical description of the electrons. Several advanced…

The dynamic scaling of distributed computations plays an important role in the utilization of elastic computational resources, such as the cloud. It enables the provisioning and de-provisioning of resources to match dynamic resource…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-19 Masatoshi Hanai , Nikos Tziritas , Toyotaro Suzumura , Wentong Cai , Georgios Theodoropoulos

We consider the classic correlation clustering problem in the hierarchical setting. Given a complete graph $G=(V,E)$ and $\ell$ layers of input information, where the input of each layer consists of a nonnegative weight and a labeling of…

Data Structures and Algorithms · Computer Science 2025-04-10 Hyung-Chan An , Mong-Jen Kao , Changyeol Lee , Mu-Ting Lee

Balanced hypergraph partitioning is a classical NP-hard optimization problem with applications in various domains such as VLSI design, simulating quantum circuits, optimizing data placement in distributed databases or minimizing…

Data Structures and Algorithms · Computer Science 2021-12-24 Lars Gottesbüren , Michael Hamann

There is a well-known connection between hypergraphs and bipartite graphs, obtained by treating the incidence matrix of the hypergraph as the biadjacency matrix of a bipartite graph. We use this connection to describe and analyse a…

Discrete Mathematics · Computer Science 2021-07-14 Martin Dyer , Catherine Greenhill , Pieter Kleer , James Ross , Leen Stougie

We study the problem of hierarchical clustering on planar graphs. We formulate this in terms of an LP relaxation of ultrametric rounding. To solve this LP efficiently we introduce a dual cutting plane scheme that uses minimum cost perfect…

Data Structures and Algorithms · Computer Science 2015-09-11 Julian Yarkony , Charless C. Fowlkes

Partitioning sparse matrices and graphs is a common and important problem in many scientific and graph analytics applications. In this work, we are concerned with a spatial partitioning called rectilinear partitioning (also known as…

Data Structures and Algorithms · Computer Science 2020-01-01 Abdurrahman Yaşar , Ümit V. Çatalyürek

Standard Gaussian Process (GP) regression, a powerful machine learning tool, is computationally expensive when it is applied to large datasets, and potentially inaccurate when data points are sparsely distributed in a high-dimensional…

Machine Learning · Computer Science 2016-03-08 Z. Zhang , K. Duraisamy , N. A. Gumerov

Local graph clustering is an important algorithmic technique for analysing massive graphs, and has been widely applied in many research fields of data science. While the objective of most (local) graph clustering algorithms is to find a…

Data Structures and Algorithms · Computer Science 2021-06-10 Peter Macgregor , He Sun

The densest subgraph problem has received significant attention, both in theory and in practice, due to its applications in problems such as community detection, social network analysis, and spam detection. Due to the high cost of obtaining…

Data Structures and Algorithms · Computer Science 2023-11-09 Pattara Sukprasert , Quanquan C. Liu , Laxman Dhulipala , Julian Shun

Most existing graph-based semi-supervised hyperspectral image classification methods rely on superpixel partitioning techniques. However, they suffer from misclassification of certain pixels due to inaccuracies in superpixel boundaries,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Yuqing Zhang , Qi Han , Ligeng Wang , Kai Cheng , Bo Wang , Kun Zhan

Bipartite graphs model the relationships between two disjoint sets of entities in several applications and are naturally drawn as 2-layer graph drawings. In such drawings, the two sets of entities (vertices) are placed on two parallel lines…

GPU-based heterogeneous architectures are now commonly used in HPC clusters. Due to their architectural simplicity specialized for data-level parallelism, GPUs can offer much higher computational throughput and memory bandwidth than CPUs in…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-15 Urvij Saroliya , Eishi Arima , Dai Liu , Martin Schulz

This paper proposes a Mixed-Integer Linear Programming approach for the Soft Graph Clustering Problem. This is the first method that simultaneously allocates membership proportion for vertices that lie in multiple clusters, and that…

Discrete Mathematics · Computer Science 2019-06-13 Vicky Mak-Hau , John Yearwood

We experimentally evaluate the practical state-of-the-art in graph bipartization (Odd Cycle Transversal), motivated by recent advances in near-term quantum computing hardware and the related embedding problems. We assemble a preprocessing…

Discrete Mathematics · Computer Science 2021-03-22 Timothy D. Goodrich , Eric Horton , Blair D. Sullivan

Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained…

Data Structures and Algorithms · Computer Science 2010-12-15 Nir Ailon , Noa Avigdor-Elgrabli , Edo Liberty

Hypergraphs, increasingly utilised for modelling complex and diverse relationships in modern networks, gain much attention representing intricate higher-order interactions. Among various challenges, cohesive subgraph discovery is one of the…

Social and Information Networks · Computer Science 2025-12-30 Song Kim , Dahee Kim , Taejoon Han , Junghoon Kim , Hyun Ji Jeong , Jungeun Kim