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Interacting systems are ubiquitous in nature and engineering, ranging from particle dynamics in physics to functionally connected brain regions. These interacting systems can be modeled by graphs where edges correspond to the interactions…

Machine Learning · Computer Science 2024-01-25 Zhichao Han , Olga Fink , David S. Kammer

We introduce a method for learning pairwise interactions in a manner that satisfies strong hierarchy: whenever an interaction is estimated to be nonzero, both its associated main effects are also included in the model. We motivate our…

Methodology · Statistics 2013-08-14 Michael Lim , Trevor Hastie

As individuals communicate, their exchanges form a dynamic network. We demonstrate, using time series analysis of communication in three online settings, that network structure alone can be highly revealing of the diversity and novelty of…

Social and Information Networks · Computer Science 2012-05-23 Chun-Yuen Teng , Liuling Gong , Avishay Livne , Celso Brunetti , Lada A. Adamic

Finding interactions between variables in large and high-dimensional datasets is often a serious computational challenge. Most approaches build up interaction sets incrementally, adding variables in a greedy fashion. The drawback is that…

Machine Learning · Statistics 2016-04-27 Rajen Dinesh Shah , Nicolai Meinshausen

Humans communicate using systems of interconnected stimuli or concepts -- from language and music to literature and science -- yet it remains unclear how, if at all, the structure of these networks supports the communication of information.…

Physics and Society · Physics 2020-03-27 Christopher W. Lynn , Lia Papadopoulos , Ari E. Kahn , Danielle S. Bassett

Pairwise relational information is a useful way of providing partial supervision in domains where class labels are difficult to acquire. This work presents a clustering model that incorporates pairwise annotations in the form of must-link…

Machine Learning · Computer Science 2021-04-07 Daniel Gribel , Michel Gendreau , Thibaut Vidal

Social and economic networks are often multiplexed, meaning that people are connected by different types of relationships -- such as borrowing goods and giving advice. We make two contributions to the study of multiplexing and the…

General Economics · Economics 2025-10-28 Arun G. Chandrasekhar , Vasu Chaudhary , Benjamin Golub , Matthew O. Jackson

Specific protein-protein interactions are crucial in the cell, both to ensure the formation and stability of multi-protein complexes, and to enable signal transduction in various pathways. Functional interactions between proteins result in…

Biological Physics · Physics 2016-11-21 Anne-Florence Bitbol , Robert S. Dwyer , Lucy J. Colwell , Ned S. Wingreen

We consider a dynamical linear network where nearest neighbours communicate via links whose states form binary (open/closed) valued independent and identically distributed Markov processes. Our main result is the tight information-theoretic…

Information Theory · Computer Science 2007-07-16 Oskari Ajanki , Antti Knowles

Free-running Recurrent Neural Networks (RNNs), especially probabilistic models, generate an ongoing information flux that can be quantified with the mutual information $I\left[\vec{x}(t),\vec{x}(t\!+\!1)\right]$ between subsequent system…

Neurons and Cognition · Quantitative Biology 2023-10-18 Claus Metzner , Marius E. Yamakou , Dennis Voelkl , Achim Schilling , Patrick Krauss

Many social, technological and biological interactions involve network relationships whose outcome intimately depends on the structure of the network and on the strengths of the connections. Yet, although much information is now available…

Statistical Mechanics · Physics 2009-11-10 Guido Caldarelli , Fabrizio Coccetti , Paolo De Los Rios

Data collection designs for social network studies frequently involve asking both parties to a potential relationship to report on the presence of absence of that relationship, resulting in two measurements per potential tie. When inferring…

Methodology · Statistics 2020-01-07 Francis Lee , Carter T Butts

Over the past decade network theory has been applied successfully to the study of a variety of complex adaptive systems. However, the application of these techniques to non-human social networks has several shortfalls. Firstly, in most…

Populations and Evolution · Quantitative Biology 2009-03-10 David Lusseau , Hal Whitehead , Shane Gero

Real-world complex systems such as ecological communities and neuron networks are essential parts of our everyday lives. These systems are composed of units which interact through intricate networks. The ability to predict sudden changes in…

Adaptation and Self-Organizing Systems · Physics 2019-07-05 Deniz Eroglu , Matteo Tanzi , Sebastian van Strien , Tiago Pereira

The characterization of various properties of real-world systems requires the knowledge of the underlying network of connections among the system's components. Unfortunately, in many situations the complete topology of this network is…

Physics and Society · Physics 2026-04-20 Valerio Gemmetto , Diego Garlaschelli

Understanding the structural mechanisms of multi-layer networks is essential for analyzing complex systems characterized by multiple interacting layers. This work studies the problem of estimating connection probabilities in multi-layer…

Methodology · Statistics 2026-02-26 Dingzi Guo , Diqing Li , Jingyi Wang , Wen-Xin Zhou

This two-part paper discusses robustification methodologies for linear-iterative distributed algorithms for consensus and coordination problems in multicomponent systems, in which unreliable communication links may drop packets. We consider…

Systems and Control · Computer Science 2011-09-30 Alejandro D. Dominguez-Garcia , Christoforos N. Hadjicostis , Nitin H. Vaidya

In networks of dynamic systems, one challenge is to identify the interconnection structure on the basis of measured signals. Inspired by a Bayesian approach in [1], in this paper, we explore a Bayesian model selection method for identifying…

Systems and Control · Computer Science 2019-03-18 Shengling Shi , Giulio Bottegal , Paul M. J. Van den Hof

We introduce the use of entanglement entropy as a tool for studying the amount of information shared between the nodes of quantum complex networks. By considering the ground state of a network of coupled quantum harmonic oscillators, we…

Physics and Society · Physics 2013-05-16 Alessio Cardillo , Fernando Galve , David Zueco , Jesús Gómez-Gardeñes

A statistical inference method is developed and tested for pairwise interacting systems whose degrees of freedom are continuous angular variables, such as planar spins in magnetic systems or wave phases in optics and acoustics. We…

Statistical Mechanics · Physics 2015-06-15 P. Tyagi , A. Pagnani , F. Antenucci , M. Ibáñez Berganza , L. Leuzzi