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Mendez et al. recently report the identification of a Y chromosome lineage from an African American that is an outgroup to all other known Y haplotypes, and report a time to most recent common ancestor, TMRCA, for human Y lineages that is…

Populations and Evolution · Quantitative Biology 2013-04-24 Melissa A. Wilson Sayres

The Eastern Banded Structure (EBS) and Hydra~I halo overdensity are very nearby (d $\sim$ 10 kpc) objects discovered in SDSS data. Previous studies of the region have shown that EBS and Hydra I are spatially coincident, cold structures at…

Astrophysics of Galaxies · Physics 2016-02-17 Jonathan R. Hargis , B. Kimmig , B. Willman , N. Caldwell , M. G. Walker , J. Strader , D. J. Sand , C. J. Grillmair , J. H. Yoon

We consider the following question: how close to the ancestral root of a phylogenetic tree is the most recent common ancestor of $k$ species randomly sampled from the tips of the tree? For trees having shapes predicted by the Yule-Harding…

Populations and Evolution · Quantitative Biology 2025-12-03 Michael Fuchs , Mike Steel

The Ishango Bone is a prehistoric artifact dated to approximately 20,000 years ago, discovered near the Semliki River in what is now the Democratic Republic of Congo, and has been the subject of scholarly debate for decades. The artifact…

History and Overview · Mathematics 2026-05-19 Jenny Baur

Demographic change of human populations is one of the central questions for delving into the past of human beings. To identify major population expansions related to male lineages, we sequenced 78 East Asian Y chromosomes at 3.9 Mbp of the…

Populations and Evolution · Quantitative Biology 2015-04-27 Shi Yan , Chuan-Chao Wang , Hong-Xiang Zheng , Wei Wang , Zhen-Dong Qin , Lan-Hai Wei , Yi Wang , Xue-Dong Pan , Wen-Qing Fu , Yun-Gang He , Li-Jun Xiong , Wen-Fei Jin , Shi-Lin Li , Yu An , Hui Li , Li Jin

For over 165 million years, dinosaurs reigned on this planet. Their entire existence saw variations in their body size and mass . Understanding the relationship between various attributes such as femur length, breadth; humerus length,…

Populations and Evolution · Quantitative Biology 2023-09-25 Akshita Patil , Nishchal Dwivedi

This article shows how to fit reticulate finite and infinite sites sequence spectra to aligned data from five modern human genomes (San, Yoruba, French, Han and Papuan) plus two archaic humans (Denisovan and Neanderthal), to better infer…

Populations and Evolution · Quantitative Biology 2011-12-30 Peter J. Waddell , Jorge Ramos , Xi Tan

We will give a simple, unified, possible explanation of several debated genetic issues on today's humans, Neandertals and Denisovans. In particular it is shown by means of a simple mathematical model why there is little genetic variation in…

Populations and Evolution · Quantitative Biology 2021-07-27 Per H. Enflo , Gustavo A. Muñoz-Fernández , Juan B. Seoane-Sepúlveda

A variant of microcephalin, MCPH1 gene, was introgressed about 37,000 years ago into Homo sapiens genetic pool from an archaic (Homo erectus) lineage and rose to exceptionally high frequency of around 70 percent worldwide today. It is…

Populations and Evolution · Quantitative Biology 2013-09-24 Konrad R. Fialkowski

The discovery of Paranthropus deyiremeda in 3.3-3.5 million year old fossil sites in Afar (Haile-Selassie, 2015), together with 30% of the gorilla genome showing lineage sorting between humans and chimpanzees (Scally, 2012), and a NUMT…

Populations and Evolution · Quantitative Biology 2018-08-22 Johan Nygren

The history of southern Africa involved interactions between indigenous hunter-gatherers and a range of populations that moved into the region. Here we use genome-wide genetic data to show that there are at least two admixture events in the…

Populations and Evolution · Quantitative Biology 2014-04-24 Joseph K. Pickrell , Nick Patterson , Po-Ru Loh , Mark Lipson , Bonnie Berger , Mark Stoneking , Brigitte Pakendorf , David Reich

Genetic association data from national biobanks and large-scale association studies have provided new prospects for understanding the genetic evolution of complex traits and diseases in humans. In turn, genomes from ancient human…

Populations and Evolution · Quantitative Biology 2021-08-06 Evan K. Irving-Pease , Rasa Muktupavela , Michael Dannemann , Fernando Racimo

All fields of knowledge are being impacted by Artificial Intelligence. In particular, the Deep Learning paradigm enables the development of data analysis tools that support subject matter experts in a variety of sectors, from physics up to…

Computer Vision and Pattern Recognition · Computer Science 2024-05-08 Andrea Barucci , Giulia Ciacci , Pietro Liò , Tiago Azevedo , Andrea Di Cencio , Marco Merella , Giovanni Bianucci , Giulia Bosio , Simone Casati , Alberto Collareta

We consider a large population of asexually reproducing individuals in absence of selective pressure. The population size is maintained constant by the environment. We find out that distances between individuals (time from the last common…

Statistical Mechanics · Physics 2007-05-23 Maurizio Serva

We present long-slit intermediate-dispersion spectroscopic observations and narrow-band direct imaging of four classical nova shells, namely TAur, HRDel, DQHer and QUVul, and the nova-like source CKVul. These are used to construct models of…

Solar and Stellar Astrophysics · Physics 2022-03-14 E. Santamaría , M. A. Guerrero , S. Zavala , G. Ramos-Larios , J. A. Toalá , L. Sabin

Divergence time estimation requires the reconciliation of two major sources of data. These are fossil and/or biogeographic evidence that give estimates of the absolute age of nodes (ancestors) and molecular estimates that give us estimates…

Populations and Evolution · Quantitative Biology 2008-12-31 Peter J Waddell

A consistent interpretation is provided for Neolithic Gobekli Tepe and Catalhoyuk as well as European Palaeolithic cave art. It appears they all display the same method for recording dates based on precession of the equinoxes, with animal…

History and Philosophy of Physics · Physics 2018-06-04 Martin B. Sweatman , Alistair Coombs

Recently discovered, the oldest human abstract drawing is around 73,000 years. Although the origins of drawing behaviour have remained an enigma to this day, light may be shone on the subject through its study among our closest neighbours,…

Neurons and Cognition · Quantitative Biology 2021-09-15 Marie Pelé , Gwendoline Thomas , Alaïs Liénard , Nagi Eguchi , Masaki Shimada , Cédric Sueur

Mitochondrial DNA from fourteen archaeological samples at the Ural State University in Yekaterinburg, Russia was extracted to test the feasibility of ancient DNA work on their collection. These samples come from a number of sites that fall…

Populations and Evolution · Quantitative Biology 2011-12-12 Casey Bennett , Frederika Kaestle

Thousands of first-millennium BCE ivory carvings have been excavated from Neo-Assyrian sites in Mesopotamia (primarily Nimrud, Khorsabad, and Arslan Tash) hundreds of miles from their Levantine production contexts. At present, their…

Machine Learning · Statistics 2014-01-07 Amy Rebecca Gansell , Jan-Willem van de Meent , Sakellarios Zairis , Chris H. Wiggins