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This is a book on higher-categorical diagrams, including pasting diagrams. It aims to provide a thorough and modern reference on the subject, collecting, revisiting and expanding results scattered across the literature, informed by recent…

Category Theory · Mathematics 2024-10-31 Amar Hadzihasanovic

Any function can be constructed using a hierarchy of simpler functions through compositions. Such a hierarchy can be characterized by a binary rooted tree. Each node of this tree is associated with a function which takes as inputs two…

Machine Learning · Computer Science 2019-10-23 Roozbeh Farhoodi , Khashayar Filom , Ilenna Simone Jones , Konrad Paul Kording

We generalize the concept of ascending and descending runs from permutations to rooted labelled trees and mappings, i.e., functions from the set $\{1, \dots, n\}$ into itself. A combinatorial decomposition of the corresponding functional…

Combinatorics · Mathematics 2020-07-06 Marie-Louise Lackner , Alois Panholzer

This paper investigates spectral properties of the deformed Laplacian matrix, which merges the Laplacian and signless Laplacian matrices of a graph through a one-parameter family of matrices. We present general results on the eigenvalues of…

Combinatorics · Mathematics 2025-12-04 Roberto C. Díaz , Elismar R. Oliveira , Vilmar Trevisan

To any real rational function with generic ramification points we assign a combinatorial object, called a garden, which consists of a weighted labeled directed planar chord diagram and of a set of weighted rooted trees each corresponding to…

Algebraic Geometry · Mathematics 2016-05-19 Sergei Natanzon , Boris Shapiro , Alek Vainshtein

The Exponential Formula allows one to enumerate any class of combinatorial objects built by choosing a set of connected components and placing a structure on each connected component which depends only on its size. There are multiple…

Combinatorics · Mathematics 2023-01-10 Robert Moerman , Lauren K. Williams

We present an elementary proof of a generalization of Kirchoff's matrix tree theorem to directed, weighted graphs. The proof is based on a specific factorization of the Laplacian matrices associated to the graphs, which only involves the…

Combinatorics · Mathematics 2019-04-30 Patrick De Leenheer

The complete knowledge of Laplacian eigenvalues and eigenvectors of complex networks plays an outstanding role in understanding various dynamical processes running on them; however, determining analytically Laplacian eigenvalues and…

Statistical Mechanics · Physics 2009-07-10 Zhongzhi Zhang , Yi Qi , Shuigeng Zhou , Yuan Lin , Jihong Guan

The modular decomposition of a symmetric map $\delta\colon X\times X \to \Upsilon$ (or, equivalently, a set of symmetric binary relations, a 2-structure, or an edge-colored undirected graph) is a natural construction to capture key features…

Combinatorics · Mathematics 2021-03-12 Carmen Bruckmann , Peter F. Stadler , Marc Hellmuth

The matrices of spanning rooted forests are studied as a tool for analysing the structure of digraphs and measuring their characteristics. The problems of revealing the basis bicomponents, measuring vertex proximity, and ranking from…

Combinatorics · Mathematics 2007-05-23 Pavel Chebotarev , Rafig Agaev

In evolutionary biology, phylogenetic networks are graphs that provide a flexible framework for representing complex evolutionary histories that involve reticulate evolutionary events. Recently phylogenetic studies have started to focus on…

Populations and Evolution · Quantitative Biology 2025-11-17 Niels Holtgrefe , Katharina T. Huber , Leo van Iersel , Mark Jones , Vincent Moulton

Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…

Combinatorics · Mathematics 2025-03-05 David Serena , William J Buchanan

An arborescence of a directed graph $\Gamma$ is a spanning tree directed toward a particular vertex $v$. The arborescences of a graph rooted at a particular vertex may be encoded as a polynomial $A_v(\Gamma)$ representing the sum of the…

Combinatorics · Mathematics 2021-08-24 Sunita Chepuri , CJ Dowd , Andy Hardt , Gregory Michel , Sylvester W. Zhang , Valerie Zhang

In this paper, we study the multiplicity of the Laplacian eigenvalues of trees. It is known that for trees, integer Laplacian eigenvalues larger than $1$ are simple and also the multiplicity of Laplacian eigenvalue $1$ has been well studied…

Combinatorics · Mathematics 2019-10-25 S. Akbari , E. R. van Dam , M. H. Fakharan

An induced forest of a graph G is an acyclic induced subgraph of G. The present paper is devoted to the analysis of a simple randomised algorithm that grows an induced forest in a regular graph. The expected size of the forest it outputs…

Combinatorics · Mathematics 2007-09-21 Carlos Hoppen , Nicholas Wormald

Trees or rooted trees have been generously studied in the literature. A forest is a set of trees or rooted trees. Here we give recurrence relations between the number of some kind of rooted forest with $k$ roots and that with $k+1$ roots on…

Combinatorics · Mathematics 2017-02-08 Song Guo , Victor J. W. Guo

We give upper and lower bounds for the Hausdorff dimensions for a class of graph-directed measures when its underlying directed graph is the infinite N-ary tree. These measures are different from graph-directed self-similar measures driven…

Classical Analysis and ODEs · Mathematics 2020-04-28 Kazuki Okamura

We present examples of rooted tree graphs for which the Laplacian has singular continuous spectral measures. For some of these examples we further establish fractional Hausdorff dimensions. The singular continuous components, in these…

Spectral Theory · Mathematics 2009-11-11 Jonathan Breuer

We systematically develop the multivariable counterpart of the theory of weighted shifts on rooted directed trees. Capitalizing on the theory of product of directed graphs, we introduce and study the notion of multishifts on directed…

Functional Analysis · Mathematics 2016-09-13 Sameer Chavan , Deepak Kumar Pradhan , Shailesh Trivedi

We obtain first order linear partial differential equations which are satisfied by exponential generating functions of two variables for the number of connected bipartite graphs with given Betti number. By solving these equations…

Combinatorics · Mathematics 2023-05-16 Taro Hasui , Tomoyuki Shirai , Satoshi Yabuoku