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The Susceptible-Infectious-Recovered (SIR) equations and their extensions comprise a commonly utilized set of models for understanding and predicting the course of an epidemic. In practice, it is of substantial interest to estimate the…

Applications · Statistics 2025-05-07 Omar Melikechi , Alexander L. Young , Tao Tang , Trevor Bowman , David Dunson , James Johndrow

In this paper we study the susceptible-infectious (SI) epidemiological model using dynamical graphs. Dynamical structures have been recently applied in many areas including complex systems. Dynamical structures include the mutual…

Populations and Evolution · Quantitative Biology 2011-10-19 Jose L. Herrera , Gilberto Gonzalez-Parra

We introduce a modified SIR model with memory for the dynamics of epidemic spreading in a constant population of individuals. Each individual is in one of the states susceptible (${\bf S}$), infected (${\bf I}$) or recovered (${\bf R}$). In…

Populations and Evolution · Quantitative Biology 2022-03-03 Michael Bestehorn , Thomas M. Michelitsch , Bernard A. Collet , Alejandro P. Riascos , Andrzej F. Nowakowski

Infectious disease superspreading caused by heterogeneity in contact behavior has been observed to be an important determinant of epidemic dynamics and size in both empirical and theoretical settings. However, it has also been observed that…

Populations and Evolution · Quantitative Biology 2026-01-27 Ari S. Freedman , Bjarke F. Nielsen , Maximillian M. Nguyen , Laurent Hébert-Dufresne , Simon A. Levin

We study a susceptible-infected-recovered (SIR) epidemic model on a network of $n$ interacting subpopulations. We analyze the transient and asymptotic behavior of the infection dynamics in each node of the network. In contrast to the…

Dynamical Systems · Mathematics 2024-03-18 Martina Alutto , Leonardo Cianfanelli , Giacomo Como , Fabio Fagnani

In this study, we develop the mathematical model to understand the coupling between the spreading dynamics of infectious diseases and the mobility dynamics through urban transportation systems. We first describe the mobility dynamics of the…

Physics and Society · Physics 2020-05-12 Xinwu Qian , Satish V. Ukkusuri

We consider multiple diseases spreading in a static Configuration Model network. We make standard assumptions that infection transmits from neighbor to neighbor at a disease-specific rate and infected individuals recover at a…

Populations and Evolution · Quantitative Biology 2015-06-11 Joel C. Miller

An epidemic model where disease transmission can occur either through global contacts or through local, nearest neighbor interactions is considered. The classical SIR--model describing the global interactions is extended by adding…

Populations and Evolution · Quantitative Biology 2022-02-02 Thomas Götz

Understanding the dynamics of the spread of diseases within populations is critical for effective public health interventions. We extend the classical SIR model by incorporating additional complexities such as the introduction of a cure and…

Populations and Evolution · Quantitative Biology 2025-10-30 Daniel Perkins , Davis Hunter , Drake Brown , Trevor Garrity , Wyatt Pochman

The Ebola Virus Disease (EVD) can persist in some body fluids after clinical recovery. In Guinea and the Democratic Republic of the Congo, there are well-documented cases of EVD reemergence that were associated with previous outbreaks. In…

Populations and Evolution · Quantitative Biology 2023-06-06 David Niyukuri , Kelly Joelle Gatore Sinigirira , Jean De Dieu Kwizera , Salma Omar Abd-Almageid Adam

We have developed a globally applicable diagnostic Covid-19 model by augmenting the classical SIR epidemiological model with a neural network module. Our model does not rely upon previous epidemics like SARS/MERS and all parameters are…

Physics and Society · Physics 2020-11-24 Raj Dandekar , Chris Rackauckas , George Barbastathis

We consider the SIR epidemiological model applied to the evolution of COVID-19 with two approaches. In the first place we fit a global SIR model, with time delay, and constant parameters throughout the outbreak, including the contagion…

Populations and Evolution · Quantitative Biology 2020-06-23 Nana Geraldine Cabo Bizet , Damián Kaloni Mayorga Peña

The outbreak of severe acute respiratory syndrome (SARS) is still threatening the world because of a possible resurgence. In the current situation that effective medical treatments such as antiviral drugs are not discovered yet, dynamical…

Other Condensed Matter · Physics 2007-05-23 Naoki Masuda , Norio Konno , Kazuyuki Aihara

An understanding of the disease spreading phenomenon based on a mathematical model is extremely needed for the implication of the correct policy measures to contain the disease propagation. Here, we report a new model namely the Ising-SIR…

Statistical Mechanics · Physics 2024-09-04 Dipak Patra

We introduce an epidemic spreading model on a network using concepts from percolation theory. The model is motivated by discussing the standard SIR model, with extensions to describe effects of lockdowns within a population. The underlying…

Physics and Society · Physics 2020-08-26 Fabrizio Croccolo , H. Eduardo Roman

The Susceptible-Infectious-Recovered (SIR) model is the canonical model of epidemics of infections that make people immune upon recovery. Many of the open questions in computational epidemiology concern the underlying contact structure's…

Physics and Society · Physics 2021-06-09 Petter Holme

Most previous studies of epidemic dynamics on complex networks suppose that the disease will eventually stabilize at either a disease-free state or an endemic one. In reality, however, some epidemics always exhibit sporadic and recurrent…

Physics and Society · Physics 2013-11-19 Xiao-Long Peng , Michael Small , Xin-Jian Xu , Xinchu Fu

How does social distancing affect the reach of an epidemic in social networks? We present Monte Carlo simulation results of a capacity constrained Susceptible-Infected-Removed (SIR) model. The key modelling feature is that individuals are…

Populations and Evolution · Quantitative Biology 2021-03-08 Gregory Gutin , Tomohiro Hirano , Sung-Ha Hwang , Philip R. Neary , Alexis Akira Toda

Motivated by epidemics such as COVID-19, we study the spread of a contagious disease when behavior responds to the disease's prevalence. We extend the SIR epidemiological model to include endogenous meeting rates. Individuals benefit from…

Populations and Evolution · Quantitative Biology 2023-09-25 Krishna Dasaratha

In this brief, we study epidemic spreading dynamics taking place in complex networks. We specifically investigate the effect of synergy, where multiple interactions between nodes result in a combined effect larger than the simple sum of…

Social and Information Networks · Computer Science 2019-04-23 Masaki Ogura , Wenjie Mei , Kenji Sugimoto
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