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Related papers: Subgraph Similarity Search in Large Graphs

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Graph-based clustering has shown promising performance in many tasks. A key step of graph-based approach is the similarity graph construction. In general, learning graph in kernel space can enhance clustering accuracy due to the…

Machine Learning · Computer Science 2019-05-22 Zhao Kang , Honghui Xu , Boyu Wang , Hongyuan Zhu , Zenglin Xu

This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various…

Machine Learning · Computer Science 2019-05-14 Yujia Li , Chenjie Gu , Thomas Dullien , Oriol Vinyals , Pushmeet Kohli

We develop an algorithm that finds the consensus of many different clustering solutions of a graph. We formulate the problem as a median set partitioning problem and propose a greedy optimization technique. Unlike other approaches that find…

Information Retrieval · Computer Science 2024-08-22 Md Taufique Hussain , Mahantesh Halappanavar , Samrat Chatterjee , Filippo Radicchi , Santo Fortunato , Ariful Azad

Graph-structured data arise ubiquitously in many application domains. A fundamental problem is to quantify their similarities. Graph kernels are often used for this purpose, which decompose graphs into substructures and compare these…

Machine Learning · Computer Science 2020-03-26 Wei Ye , Zhen Wang , Rachel Redberg , Ambuj Singh

There has been significant recent interest in parallel graph processing due to the need to quickly analyze the large graphs available today. Many graph codes have been designed for distributed memory or external memory. However, today even…

Data Structures and Algorithms · Computer Science 2019-08-22 Laxman Dhulipala , Guy E. Blelloch , Julian Shun

Finding densely connected subsets of vertices in an unsupervised setting, called clustering or community detection, is one of the fundamental problems in network science. The edge clustering approach instead detects communities by…

Social and Information Networks · Computer Science 2026-03-02 Ryan DeWolfe , François Théberge

We present an exact algorithm for computing all common subgraphs with the maximum number of vertices across multiple graphs. Our approach is further extended to handle the connected Maximum Common Subgraph (MCS), identifying the largest…

Data Structures and Algorithms · Computer Science 2025-04-03 Johannes B. S. Petersen , Akbar Davoodi , Thomas Gärtner , Marc Hellmuth , Daniel Merkle

We introduce a new distributed algorithm for aligning graphs or finding substructures within a given graph. It is based on the cavity method and is used to study the maximum-clique and the graph-alignment problems in random graphs. The…

Quantitative Methods · Quantitative Biology 2010-04-02 S. Bradde , A. Braunstein , H. Mahmoudi , F. Tria , M. Weigt , R. Zecchina

Estimating similarity between vertices is a fundamental issue in network analysis across various domains, such as social networks and biological networks. Methods based on common neighbors and structural contexts have received much…

Social and Information Networks · Computer Science 2015-04-14 Jing Zhang , Jie Tang , Cong Ma , Hanghang Tong , Yu Jing , Juanzi Li

Given a graph $G$ and a vertex $q\in G$, the community search (CS) problem aims to efficiently find a subgraph of $G$ whose vertices are closely related to $q$. Communities are prevalent in social and biological networks, and can be used in…

Databases · Computer Science 2019-01-18 Yankai Chen , Yixiang Fang , Reynold Cheng , Yun Li , Xiaojun Chen , Jie Zhang

Graph kernels are widely used for measuring the similarity between graphs. Many existing graph kernels, which focus on local patterns within graphs rather than their global properties, suffer from significant structure information loss when…

Machine Learning · Computer Science 2019-12-02 Lingfei Wu , Ian En-Hsu Yen , Zhen Zhang , Kun Xu , Liang Zhao , Xi Peng , Yinglong Xia , Charu Aggarwal

This paper studies the nucleus decomposition problem, which has been shown to be useful in finding dense substructures in graphs. We present a novel parallel algorithm that is efficient both in theory and in practice. Our algorithm achieves…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-12 Jessica Shi , Laxman Dhulipala , Julian Shun

Graph-structured data are an integral part of many application domains, including chemoinformatics, computational biology, neuroimaging, and social network analysis. Over the last two decades, numerous graph kernels, i.e. kernel functions…

Machine Learning · Computer Science 2021-03-10 Karsten Borgwardt , Elisabetta Ghisu , Felipe Llinares-López , Leslie O'Bray , Bastian Rieck

We discuss the problem of extending data mining approaches to cases in which data points arise in the form of individual graphs. Being able to find the intrinsic low-dimensionality in ensembles of graphs can be useful in a variety of…

Social and Information Networks · Computer Science 2016-12-12 Karthikeyan Rajendran , Assimakis A. Kattis , Alexander Holiday , Risi Kondor , Ioannis G. Kevrekidis

Social media data are often modeled as heterogeneous graphs with multiple types of nodes and edges. We present a discovery algorithm that first chooses a "background" graph based on a user's analytical interest and then automatically…

Social and Information Networks · Computer Science 2021-04-23 Subhasis Dasgupta , Amarnath Gupta

Higher-order connectivity patterns such as small induced sub-graphs called graphlets (network motifs) are vital to understand the important components (modules/functional units) governing the configuration and behavior of complex networks.…

Social and Information Networks · Computer Science 2020-09-15 Aldo G. Carranza , Ryan A. Rossi , Anup Rao , Eunyee Koh

Graph mining has become crucial in fields such as social science, finance, and cybersecurity. Many large-scale real-world networks exhibit both heterogeneity, where multiple node and edge types exist in the graph, and heterophily, where…

Machine Learning · Computer Science 2025-06-04 Junhong Lin , Xiaojie Guo , Shuaicheng Zhang , Yada Zhu , Julian Shun

Graph pattern matching involves finding exact or approximate matches for a query subgraph in a larger graph. It has been studied extensively and has strong applications in domains such as computer vision, computational biology, social…

Databases · Computer Science 2012-08-02 Sutanay Choudhury , Lawrence Holder , George Chin , John Feo

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

Pioneered by Google's Pregel, many distributed systems have been developed for large-scale graph analytics. These systems expose the user-friendly "think like a vertex" programming interface to users, and exhibit good horizontal…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-01-26 Da Yan , James Cheng , M. Tamer Özsu , Fan Yang , Yi Lu , John C. S. Lui , Qizhen Zhang , Wilfred Ng
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