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We study a simplified model of monoclonal antibodies confined in a patchy random porous medium. Antibodies are represented as Y-shaped particles composed of seven tangential hard spheres with attractive patches on the terminal beads, while…

Soft Condensed Matter · Physics 2026-03-31 Yu. V. Kalyuzhnyi , T. Patsahan

Thermodynamic tools are well suited to connecting evolution of protein functionalities to mutations of amino acid sequences, especially for neuronal network structures. These tools enable one to quantify changes in modular structure and…

Biomolecules · Quantitative Biology 2014-10-07 J. C. Phillips

Some white dwarfs undergo significant changes in atmospheric composition owing to the diffusion and mixing of residual hydrogen in a helium-rich envelope. Of particular interest are a few objects exhibiting hydrogen and helium line…

Solar and Stellar Astrophysics · Physics 2025-01-28 Antoine Bédard , Pier-Emmanuel Tremblay

From extensive Monte Carlo simulations of a Larson model of perfectly periodic heteropolymers (PHP) in water a striking stiffening is observed as the period of the alternating hydrophobic and hydrophilic blocks is shortened. At short period…

Statistical Mechanics · Physics 2009-10-31 Debashish Chowdhury , Dietrich Stauffer , Reinhard Strey , ;

Temperature controlled Polarization Modulation Near-Field Scanning Optical Microscopy (PM-NSOM) measurements of a single supported $L_{\beta^{\prime}}$ 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) lipid bilayer are presented. The…

Soft Condensed Matter · Physics 2020-04-01 Merrell A. Johnson , Ricardo S. Decca

Magnetic trapping of bromine atoms at temperatures in the milliKelvin regime is demonstrated for the first time. The atoms are produced by photodissociation of Br$_2$ molecules in a molecular beam. The lab-frame velocity of Br atoms is…

Atomic Physics · Physics 2014-02-21 C. J. Rennick , J. Lam , W. G. Doherty , T. P. Softley

Ultracold atoms in optical lattices have great potential to contribute to a better understanding of some of the most important issues in many-body physics, such as high-$T_c$ superconductivity. The Hubbard model describes many of the…

The structure of the cuticle of arthropods consists of layers of microfilamentary chitin particles. The layers are stacked one on top of the other realizing a helical (Bouligand helix) pattern. This structure generates optical phenomena…

We examine over 160 archival H$\alpha$ spectra from the Ritter Observatory for the interacting binary $\beta$~Lyr obtained between 1996 and 2000. The emission is characteristically double-peaked, but asymmetric, and with an absorption…

Solar and Stellar Astrophysics · Physics 2018-08-29 Richard Ignace , Sharon Gray , Macon Magno , Gary Henson , Derck Massa

The conformation and the phase diagram of a membrane protein are investigated via grand canonical ensemble approach using a homopolymer model. We discuss the nature and pathway of $\alpha$-helix integration into the membrane that results…

Soft Condensed Matter · Physics 2009-10-31 Pyeong Jun Park , W. Sung

We investigate cooling mechanisms in magneto-optically and magnetically trapped erbium. We find efficient sub-Doppler cooling in our trap, which can persist even in large magnetic fields due to the near degeneracy of two Lande g factors.…

Atomic Physics · Physics 2009-09-29 Andrew J. Berglund , Siu Au Lee , Jabez J. McClelland

The adhesive and frictional response of an AFM tip connected to a substrate through supramolecular host-guest complexes is investigated by dynamic Monte Carlo simulations. The variation of the pull-off force with the unloading rate recently…

Soft Condensed Matter · Physics 2016-04-13 Roberto Guerra , Andrea Benassi , Andrea Vanossi , Ming Ma , Michael Urbakh

We investigate theoretically the optical properties of an atomic gas which has been cooled by the laser cooling method velocity-selective coherent population trapping. We demonstrate that the application of a weak laser pulse gives rise to…

Quantum Physics · Physics 2009-11-11 M. Kiffner , K. -P. Marzlin

The resuspension and dispersion of particles occur in industrial fluid dynamic processes as well as environmental and geophysical situations. In this paper, we experimentally investigate the ability to fluidize a granular bed with a…

Fluid Dynamics · Physics 2017-09-07 Cyprien Morize , Eric Herbert , Alban Sauret

We report the first detailed spectroscopic observations of the recently identified intermediate polar RXJ0028.8+5917/V709 Cas. We discovered that the system shows significant EW ~ (2-4)A broad absorptions, affecting the Balmer lines from…

Astrophysics · Physics 2007-05-23 J. M. Bonnet-Bidaud , M. Mouchet , D. de Martino , G. Matt , C. Motch

The Doppler parameter distribution of Lyman-alpha absorption is calculated for a set of different reionization histories. The differences in temperature between different reionization histories are as large as a factor three to four…

Astrophysics · Physics 2009-10-30 Martin G. Haehnelt , Matthias Steinmetz

We report on the frozen-spin polarized hydrogen--deuteride (HD) targets for photoproduction experiments at SPring-8/LEPS. Pure HD gas with a small amount of ortho-H2 (~0.1%) was liquefied and solidified by liquid helium. The temperature of…

Instrumentation and Detectors · Physics 2020-09-11 T. Ohta , M. Fujiwara , T. Hotta , I. Ide , K. Ishizaki , H. Kohri , Y. Yanai , M. Yosoi

Plasmonic biosensing chips were prepared by fabricating wavelength-scaled dielectric-metal interfacial gratings on polymer film covered bimetal layers. Lysozyme biomolecules (LYZ) and gold nanoparticle bioconjugates (AuNP-LYZ) with 1:5 mass…

A central unresolved question in fusion energy research is whether energetic alpha particles, the primary products of deuterium-tritium fusion reactions, enhance or degrade plasma confinement. In burning plasmas, the operating regime of…

The PAX project at GSI Darmstadt plans to polarize an antiproton beam by repeated interaction with a hydrogen target in a storage ring. Many of the beam particles are required to remain within the ring after interaction with the target, so…

High Energy Physics - Phenomenology · Physics 2014-11-18 D. S. O'Brien , N. H. Buttimore