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Phylogenetic comparative methods correct for shared evolutionary history among a set of non-independent organisms by modeling sample traits as arising from a diffusion process along on the branches of a possibly unknown history. To…

Applications · Statistics 2020-09-30 Paul Bastide , Lam Si Tung Ho , Guy Baele , Philippe Lemey , Marc A Suchard

We study finite-horizon continuous-time policy evaluation from discrete closed-loop trajectories under time-inhomogeneous dynamics. The target value surface solves a backward parabolic equation, but the Bellman baseline obtained from…

Machine Learning · Statistics 2026-05-11 Yaowei Zheng , Richong Zhang , Shenxi Wu , Shirui Bian , Haosong Zhang , Li Zeng , Xingjian Ma , Yichi Zhang

Non-linear maps can possess various dynamical behaviors varying from stable steady states and cycles to chaotic oscillations. Most models assume that individuals within a given population are identical ignoring the fundamental role of…

Populations and Evolution · Quantitative Biology 2007-05-23 Georgy P. Karev

High Harmonic Generation (HHG), which has been widely used in atomic gas, has recently expanded to solids as a means to study highly nonlinear electronic response in condensed matter and produce coherent high frequency radiation with new…

Mesoscale and Nanoscale Physics · Physics 2023-01-04 Dasol Kim , Dongbin Shin , Alexandra S. Landsman , Dong Eon Kim , Alexis Chacón

We propose a random-effects approach to missing values for generalized linear mixed model (GLMM) analysis. The method converts a GLMM with missing covariates to another GLMM without missing covariates. The standard GLMM analysis tools for…

Methodology · Statistics 2026-01-01 Thuan Nguyen , Jiangshan Zhang , Jiming Jiang

The log-linear model has received a significant amount of theoretical attention in previous decades and remains the fundamental tool used for learning probability distributions over discrete variables. Despite its large popularity in…

Machine Learning · Computer Science 2026-04-14 James Enouen , Mahito Sugiyama

We present a model reduction approach for the real-time solution of time-dependent nonlinear partial differential equations (PDEs) with parametric dependencies. The approach integrates several ingredients to develop efficient and accurate…

Numerical Analysis · Mathematics 2024-10-04 Ngoc Cuong Nguyen

We present a new Hamiltonian-learning framework based on time-resolved measurement data from a fixed local IC-POVM and its application to inferring gene regulatory networks. We introduce the quantum Hamiltonian-based gene-expression model…

Quantum Physics · Physics 2026-02-24 Mohammad Aamir Sohail , Ranga R. Sudharshan , S. Sandeep Pradhan , Arvind Rao

A discrete-time conditional Gaussian Koopman network (CGKN) is developed in this work to learn surrogate models that can perform efficient state forecast and data assimilation (DA) for high-dimensional complex dynamical systems, e.g.,…

Machine Learning · Computer Science 2025-08-19 Chuanqi Chen , Zhongrui Wang , Nan Chen , Jin-Long Wu

In genome-wide prediction, independence of marker allele substitution effects is typically assumed; however, since early stages of this technology it has been known that nature points to correlated effects. In statistics, graphical models…

Quantitative Methods · Quantitative Biology 2017-09-21 Carlos Alberto Martínez , Kshitij Khare , Syed Rahman , Mauricio A. Elzo

We introduce Midpoint Generative Models (MGM), a principled framework for training one-step generative models. MGM is based on a simple symmetry of Flow Matching with linear interpolation: when the two endpoint distributions coincide, the…

Machine Learning · Computer Science 2026-05-29 Daniil Shlenskii , Nikita Gushchin , Lev Novitskiy , Dmitry V. Dylov , Alexander Korotin

A connection between the General Linear Model (GLM) in combination with classical statistical inference and the machine learning (MLE)-based inference is described in this paper. Firstly, the estimation of the GLM parameters is expressed as…

Machine Learning · Statistics 2022-02-10 Juan Manuel Gorriz , SIPBA group , John Suckling

The majority of model-based learned image reconstruction methods in medical imaging have been limited to uniform domains, such as pixelated images. If the underlying model is solved on nonuniform meshes, arising from a finite element method…

Image and Video Processing · Electrical Eng. & Systems 2021-07-12 William Herzberg , Daniel B. Rowe , Andreas Hauptmann , Sarah J. Hamilton

Restricted Boltzmann Machines (RBMs) are generative models which can learn useful representations from samples of a dataset in an unsupervised fashion. They have been widely employed as an unsupervised pre-training method in machine…

Machine Learning · Statistics 2013-09-13 Chris Häusler , Alex Susemihl , Martin P Nawrot , Manfred Opper

We study an inverse initial-density problem for a nonlinear diffusive coagulation--fragmentation equation with known coagulation and fragmentation kernels. The objective is to recover the unknown initial particle-size distribution on a…

Numerical Analysis · Mathematics 2026-03-24 Thuy T. Le , Minh-Binh Tran , Loc H. Nguyen

In the classic measurement error framework, covariates are contaminated by independent additive noise. This paper considers parameter estimation in such a linear errors-in-variables model where the unknown measurement error distribution is…

Methodology · Statistics 2023-10-24 Linh H. Nghiem , Cornelis J. Potgieter

In this paper, we discuss computational aspects to obtain accurate inferences for the parameters of the generalized gamma (GG) distribution. Usually, the solution of the maximum likelihood estimators (MLE) for the GG distribution have no…

Computation · Statistics 2017-07-26 Jorge Alberto Achcar , Pedro Luiz Ramos , Edson Zangiacomi Martinez

This two-part work considers the minimum means square error (MMSE) estimation problem for a high dimensional multi-layer generalized linear model (ML-GLM), which resembles a feed-forward fully connected deep learning network in that each of…

Information Theory · Computer Science 2020-07-21 Haochuan Zhang , Qiuyun Zou , Hongwen Yang

We consider the model reduction problem for linear time-invariant dynamical systems having nonzero (but otherwise indeterminate) initial conditions. Building upon the observation that the full system response is decomposable as a…

Systems and Control · Computer Science 2017-01-04 Christopher A. Beattie , Serkan Gugercin , Volker Mehrmann

Analyzing data from multiple sources offers valuable opportunities to improve the estimation efficiency of causal estimands. However, this analysis also poses many challenges due to population heterogeneity and data privacy constraints.…

Methodology · Statistics 2025-10-23 Rong Zhao , Jason Falvey , Xu Shi , Vernon M. Chinchilli , Chixiang Chen
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