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Given a distance matrix consisting of pairwise distances between species, a distance-based phylogenetic reconstruction method returns a tree metric or equidistant tree metric (ultrametric) that best fits the data. We investigate…

Combinatorics · Mathematics 2017-02-20 Daniel Irving Bernstein , Colby Long

Minimum spanning trees and forests are powerful sparsification techniques that remove cycles from weighted graphs to minimize total edge weight while preserving node connectivity. They have applications in computer science, network science,…

Discrete Mathematics · Computer Science 2024-03-25 Jordan C Rozum , Luis M Rocha

We consider the problem of exploring an unknown tree with a team of $k$ initially colocated mobile agents. Each agent has limited energy and cannot, as a result, traverse more than $B$ edges. The goal is to maximize the number of nodes…

Data Structures and Algorithms · Computer Science 2018-02-20 Evangelos Bampas , Jérémie Chalopin , Shantanu Das , Jan Hackfeld , Christina Karousatou

In the decremental single-source shortest paths problem, the goal is to maintain distances from a fixed source $s$ to every vertex $v$ in an $m$-edge graph undergoing edge deletions. In this paper, we conclude a long line of research on…

Data Structures and Algorithms · Computer Science 2021-01-20 Aaron Bernstein , Maximilian Probst Gutenberg , Thatchaphol Saranurak

While obtaining optimal algorithms for the most important problems in the LOCAL model has been one of the central goals in the area of distributed algorithms since its infancy, tight complexity bounds are elusive for many problems even when…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-06 Sebastian Brandt , Ananth Narayanan

This paper presents a unified computational framework for the estimation of distances, geodesics and barycenters of merge trees. We extend recent work on the edit distance [106] and introduce a new metric, called the Wasserstein distance…

Graphics · Computer Science 2021-09-21 Mathieu Pont , Jules Vidal , Julie Delon , Julien Tierny

We study network loss tomography based on observing average loss rates over a set of paths forming a tree -- a severely underdetermined linear problem for the unknown link loss probabilities. We examine in detail the role of sparsity as a…

Networking and Internet Architecture · Computer Science 2015-03-19 Vijay Arya , Darryl Veitch

Optimizing paths on networks is crucial for many applications, from subway traffic to Internet communication. As global path optimization that takes account of all path-choices simultaneously is computationally hard, most existing routing…

Physics and Society · Physics 2013-09-05 Chi Ho Yeung , David Saad , K. Y. Michael Wong

We give the first constant-factor approximation algorithm for Sparsest Cut with general demands in bounded treewidth graphs. In contrast to previous algorithms, which rely on the flow-cut gap and/or metric embeddings, our approach exploits…

Data Structures and Algorithms · Computer Science 2010-06-24 Eden Chlamtac , Robert Krauthgamer , Prasad Raghavendra

We propose a protocol optimization technique that is applicable to both weighted or unweighted graphs. Our aim is to explore by how much a small variation around the Shortest Path or Optimal Path protocols can enhance protocol performance.…

Physics and Society · Physics 2015-05-19 Jose J. Ramasco , Marta S. de la Lama , Eduardo Lopez , Stefan Boettcher

By-tree information gathering is an essential task in precision agriculture achieved by ground mobile sensors, but it can be time- and labor-intensive. In this paper we present an algorithmic framework to perform real-time and on-the-go…

Elastic geodesic grids deploy from flat to spatial configurations via complex nonlinear motion that is difficult to represent robustly for simulation. We present a geometric guidance framework that discretizes deployment as synchronized,…

Graphics · Computer Science 2026-04-27 Stefan Pillwein , Alexander Hentschel , Markus Lukacevic , Przemyslaw Musialski

We present an analytical approach to calculating the distribution of shortest paths lengths (also called intervertex distances, or geodesic paths) between nodes in unweighted undirected networks. We obtain very accurate results for…

Physics and Society · Physics 2016-04-20 Sergey Melnik , James P. Gleeson

This paper presents a novel algorithm, called MRRT, which uses multiple rapidly-exploring random trees for fast online replanning of autonomous vehicles in dynamic environments with moving obstacles. The proposed algorithm is built upon the…

Robotics · Computer Science 2021-04-23 Zongyuan Shen , James P. Wilson , Ryan Harvey , Shalabh Gupta

What is the shortest path between two data points lying in a high-dimensional space? While the answer is trivial in Euclidean geometry, it becomes significantly more complex when the data lies on a curved manifold -- requiring a Riemannian…

Machine Learning · Computer Science 2025-11-04 Louis Béthune , David Vigouroux , Yilun Du , Rufin VanRullen , Thomas Serre , Victor Boutin

It is shown that a minimum weight spanning tree of a finite ultrametric space can be always found in the form of path. As a canonical representing tree such path uniquely defines the whole space and, moreover, it has much more simple…

General Topology · Mathematics 2024-12-24 Evgeniy Petrov

CSG trees are an intuitive, yet powerful technique for the representation of geometry using a combination of Boolean set-operations and geometric primitives. In general, there exists an infinite number of trees all describing the same 3D…

Artificial Intelligence · Computer Science 2020-09-15 Markus Friedrich , Christoph Roch , Sebastian Feld , Carsten Hahn , Pierre-Alain Fayolle

Many popular algorithms for searching the space of leaf-labelled trees are based on tree rearrangement operations. Under any such operation, the problem is reduced to searching a graph where vertices are trees and (undirected) edges are…

Data Structures and Algorithms · Computer Science 2020-07-27 Lena Collienne , Alex Gavryushkin

We present a dynamic subspace approach for efficiently approximating large-scale systems by learning time-continuous trajectories on the Grassmannian manifold. By parameterizing a low-dimensional basis as a geodesic path, the method allows…

Numerical Analysis · Mathematics 2026-05-26 Jack DeChant , Rudy Geelen , Shane A. McQuarrie , Johann Guilleminot

This paper addresses the problem of finding a representation of a subtree distance, which is an extension of the tree metric. We show that a minimal representation is uniquely determined by a given subtree distance, and give a linear time…

Data Structures and Algorithms · Computer Science 2019-02-26 Takanori Maehara , Kazutoshi Ando
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