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Turing patterns formed by activator-inhibitor systems on networks are considered. The linear stability analysis shows that the Turing instability generally occurs when the inhibitor diffuses sufficiently faster than the activator. Numerical…

Pattern Formation and Solitons · Physics 2010-04-29 Hiroya Nakao , Alexander S. Mikhailov

Recording simultaneous activity of hundreds of neurons is now possible. Existing methods can model such population activity, but do not directly reveal the computations used by the brain. We present a fully unsupervised method that models…

Neurons and Cognition · Quantitative Biology 2020-03-24 Connor Brennan , Alex Proekt

Passive network tomography uses end-to-end observations of network communication to characterize the network, for instance to estimate the network topology and to localize random or adversarial glitches. Under the setting of linear network…

Networking and Internet Architecture · Computer Science 2016-11-15 Hongyi Yao , Sidharth Jaggi , Minghua Chen

Complex molecules and mesoscopic structures are naturally described by general networks of elementary building blocks and tight-binding is one of the simplest quantum model suitable for studying the physical properties arising from the…

Condensed Matter · Physics 2009-11-07 P. Buonsante , R. Burioni , D. Cassi

Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

Network epidemiology has become a core framework for investigating the role of human contact patterns in the spreading of infectious diseases. In network epidemiology represents the contact structure as a network of nodes (individuals)…

Populations and Evolution · Quantitative Biology 2014-06-10 Petter Holme

Genetic regulatory networks are defined by their topology and by a multitude of continuously adjustable parameters. Here we present a class of simple models within which the relative importance of topology vs. interaction strengths becomes…

Molecular Networks · Quantitative Biology 2013-08-02 Mikhail Tikhonov , William Bialek

In this paper, we study the problem of constructing a network by observing ordered connectivity constraints, which we define herein. These ordered constraints are made to capture realistic properties of real-world problems that are not…

Data Structures and Algorithms · Computer Science 2017-02-24 Yi Huang , Mano Vikash Janardhanan , Lev Reyzin

Predicting how the brain can be driven to specific states by means of internal or external control requires a fundamental understanding of the relationship between neural connectivity and activity. Network control theory is a powerful tool…

Neurons and Cognition · Quantitative Biology 2019-08-12 Teresa M. Karrer , Jason Z. Kim , Jennifer Stiso , Ari E. Kahn , Fabio Pasqualetti , Ute Habel , Danielle S. Bassett

Network models are routinely downscaled compared to nature in terms of numbers of nodes or edges because of a lack of computational resources, often without explicit mention of the limitations this entails. While reliable methods have long…

Neurons and Cognition · Quantitative Biology 2016-02-17 Sacha Jennifer van Albada , Moritz Helias , Markus Diesmann

In this paper, we study crucial elements of a complex network, namely its nodes and connections, which play a key role in maintaining the network's structure and function under unexpected structural perturbations of nodes and edges removal.…

Social and Information Networks · Computer Science 2017-02-07 Hung T. Nguyen , Nam P. Nguyen , Tam Vu , Huan X. Hoang , Thang N. Dinh

Many networks can be usefully decomposed into a dense core plus an outlying, loosely-connected periphery. Here we propose an algorithm for performing such a decomposition on empirical network data using methods of statistical inference. Our…

Social and Information Networks · Computer Science 2015-06-22 Xiao Zhang , Travis Martin , M. E. J. Newman

In this paper, we aim to find a robust network formation strategy that can adaptively evolve the network topology against network dynamics in a distributed manner. We consider a network coding deployed wireless ad hoc network where source…

Networking and Internet Architecture · Computer Science 2019-07-02 Minhae Kwon , Hyunggon Park

We currently witness the emergence of interesting new network topologies optimized towards the traffic matrices they serve, such as demand-aware datacenter interconnects (e.g., ProjecToR) and demand-aware overlay networks (e.g., SplayNets).…

Networking and Internet Architecture · Computer Science 2017-05-23 Chen Avin , Alexandr Hercules , Andreas Loukas , Stefan Schmid

Network connectedness is indispensable for the normal operation of transmission networks. However, there still remains a lack of efficient constraints that can be directly added to the problem formulation of optimal transmission switching…

Systems and Control · Electrical Eng. & Systems 2020-12-29 Tong Han , Yue Song , David J. Hill

This paper focuses on the multi-agent synchronization problem with an open-loop unstable leader and followers under the switching topologies. For this issue, the typical approach is intermittent communication (including a spanning tree…

Dynamical Systems · Mathematics 2026-04-28 Haotian Xu , Bohui Wang , Shuai Liu , Chao Shen , Xiangyu Meng , Guanghui Wen

Two very important problems regarding spreading phenomena in complex topologies are the optimal selection of node sets either to minimize or maximize the extent of outbreaks. Both problems are nontrivial when a small fraction of the nodes…

Physics and Society · Physics 2017-01-23 Filippo Radicchi , Claudio Castellano

We consider a discrete system of $n$ devices lying on a 2-dimensional square grid and forming an initial connected shape $S_I$. Each device is equipped with a linear-strength mechanism which enables it to move a whole line of consecutive…

Data Structures and Algorithms · Computer Science 2020-05-19 Abdullah Almethen , Othon Michail , Igor Potapov

This article studies disruption tolerant networks (DTNs) where each node knows the probabilistic distribution of contacts with other nodes. It proposes a framework that allows one to formalize the behaviour of such a network. It generalizes…

Networking and Internet Architecture · Computer Science 2007-05-23 Jean-Marc Francois , Guy Leduc

In communication networks structure and dynamics are tightly coupled. The structure controls the flow of information and is itself shaped by the dynamical process of information exchanged between nodes. In order to reconcile structure and…

Physics and Society · Physics 2013-04-08 Jan O. Haerter , Bjorn Jamtveit , Joachim Mathiesen