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Cells must continuously sense and respond to time-varying environmental stimuli. These signals are transmitted and processed by biochemical signalling networks. However, the biochemical reactions making up these networks are intrinsically…

Molecular Networks · Quantitative Biology 2015-05-18 Filipe Tostevin , Pieter Rein ten Wolde

Correlation matrices contain a wide variety of spatio-temporal information about a dynamical system. Predicting correlation matrices from partial time series information of a few nodes characterizes the spatio-temporal dynamics of the…

Machine Learning · Computer Science 2023-03-14 Nikhil Easaw , Woo Seok Lee , Prashant Singh Lohiya , Sarika Jalan , Priodyuti Pradhan

The ability to predict the behavior of a wireless channel in terms of the frame delivery ratio is quite valuable, and permits, e.g., to optimize the operating parameters of a wireless network at runtime, or to proactively react to the…

Networking and Internet Architecture · Computer Science 2023-12-14 Gabriele Formis , Stefano Scanzio , Gianluca Cena , Adriano Valenzano

Over the brief time intervals available for processing retinal output, roughly 50 to 300 msec, the number of extra spikes generated by individual ganglion cells can be quite variable. Here, computer-generated spike trains were used to…

Neurons and Cognition · Quantitative Biology 2007-09-14 Garrett T. Kenyon

Neurons in many brain areas can develop pronounced depolarized state of membrane potential (up state) in addition to the normal hyperpolarized down state near the resting potential. The influence of the up state on signal encoding, however,…

Neurons and Cognition · Quantitative Biology 2015-09-30 Wei Wei , Fred Wolf , Xiao-Jing Wang

We present a novel control policy, called Predictive Network Control (PNC) to control wireless communication networks (on packet level), based on paradigms of Model Predictive Control (MPC). In contrast to common myopic policies, who use…

Signal Processing · Electrical Eng. & Systems 2018-09-03 Richard Schoeffauer , Gerhard Wunder

A recurrent idea in the study of complex systems is that optimal information processing is to be found near bifurcation points or phase transitions. However, this heuristic hypothesis has few (if any) concrete realizations where a standard…

Neurons and Cognition · Quantitative Biology 2007-05-23 Osame Kinouchi , Mauro Copelli

Accurate channel prediction is essential for addressing channel aging caused by user mobility. However, the actual channel variations over time are highly complex in high-mobility scenarios, which makes it difficult for existing predictors…

Signal Processing · Electrical Eng. & Systems 2024-12-24 Jinke Li , Jieao Zhu , Linglong Dai

The brain is characterized by a strong heterogeneity of inhibitory neurons. We report that spiking neural networks display a resonance to the heterogeneity of inhibitory neurons, with optimal input/output responsiveness occurring for levels…

Neurons and Cognition · Quantitative Biology 2021-09-30 Matteo di Volo , Alain Destexhe

Signal maps are essential for the planning and operation of cellular networks. However, the measurements needed to create such maps are expensive, often biased, not always reflecting the metrics of interest, and posing privacy risks. In…

Machine Learning · Computer Science 2022-02-15 Emmanouil Alimpertis , Athina Markopoulou , Carter T. Butts , Evita Bakopoulou , Konstantinos Psounis

Spiking Neural Networks (SNNs) are highly energy-efficient due to event-driven, sparse computation, but their training is challenged by spike non-differentiability and trade-offs among performance, efficiency, and biological plausibility.…

Neural and Evolutionary Computing · Computer Science 2026-01-30 Zihan Huang , Zijie Xu , Yihan Huang , Shanshan Jia , Tong Bu , Yiting Dong , Wenxuan Liu , Jianhao Ding , Zhaofei Yu , Tiejun Huang

This paper develops a mathematical framework to study signal networks, in which nodes can be active or inactive, and their activation or deactivation is driven by external signals and the states of the nodes to which they are connected via…

Probability · Mathematics 2025-10-14 Bernd Heidergott , Frank den Hollander , Ines Lindner , Azadeh Parvaneh

Novel experimental techniques reveal the simultaneous activity of larger and larger numbers of neurons. As a result there is increasing interest in the structure of cooperative -- or correlated -- activity in neural populations, and in the…

Neurons and Cognition · Quantitative Biology 2015-05-30 James Trousdale , Yu Hu , Eric Shea-Brown , Krešimir Josić

This study presents an innovative approach to predicting VCSEL emission characteristics using transformer neural networks. We demonstrate how to modify the transformer neural network for applications in physics. Our model achieved high…

Disordered Systems and Neural Networks · Physics 2025-09-17 Aleksei V. Belonovskii , Elizaveta I. Girshova , Erkki Lähderanta , Mikhail Kaliteevski

Exploiting the information provided by the molecular noise of a biological process has proven to be valuable in extracting knowledge about the underlying kinetic parameters and sources of variability from single cell measurements. However,…

Quantitative Methods · Quantitative Biology 2013-08-30 Jakob Ruess , Andreas Milias-Argeitis , John Lygeros

Across scientific domains, a fundamental challenge is to characterize and compute the mappings from underlying physical processes to observed signals and measurements. While nonlinear neural networks have achieved considerable success, they…

Machine Learning · Computer Science 2025-08-11 Alexander DeLise , Kyle Loh , Krish Patel , Meredith Teague , Andrea Arnold , Matthias Chung

Neurons and networks in the cerebral cortex must operate reliably despite multiple sources of noise. To evaluate the impact of both input and output noise, we determine the robustness of single-neuron stimulus selective responses, as well…

Neurons and Cognition · Quantitative Biology 2018-01-24 Ran Rubin , L. F. Abbott , Haim Sompolinsky

Sample-efficient machine learning (SEML) has been widely applied to find optimal latency and power tradeoffs for configurable computer systems. Instead of randomly sampling from the configuration space, SEML reduces the search cost by…

Machine Learning · Computer Science 2022-04-12 Yi Ding , Alex Renda , Ahsan Pervaiz , Michael Carbin , Henry Hoffmann

One of the main issues in the design of sensor networks is energy efficient communication of time-critical data. Energy wastage can be caused by failed packet transmission attempts at each node due to channel dynamics and interference.…

Networking and Internet Architecture · Computer Science 2011-05-24 Rahul Srivastava , Can Emre Koksal

The cellular network provides convenient network access for ever-growing mobile phones. During the continuous optimization, operators can adjust cell parameters to enhance the Quality of Service (QoS) flexibly. A precise prediction of the…

Networking and Internet Architecture · Computer Science 2024-08-29 Mingjie Li , Yongqian Sun , Xiaolei Hua , Renkai Yu , Xinwen Fan , Lin Zhu , Junlan Feng , Dan Pei