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Dimensionality reduction techniques are essential for visualizing and analyzing high-dimensional biological sequencing data. t-distributed Stochastic Neighbor Embedding (t-SNE) is widely used for this purpose, traditionally employing the…

Machine Learning · Computer Science 2025-12-19 Avais Jan , Prakash Chourasia , Sarwan Ali , Murray Patterson

While deep neural networks (DNNs) are an increasingly popular way to query large corpora of data, their significant runtime remains an active area of research. As a result, researchers have proposed systems and optimizations to reduce these…

Databases · Computer Science 2020-07-28 Daniel Kang , Ankit Mathur , Teja Veeramacheneni , Peter Bailis , Matei Zaharia

Neighbor embeddings are a family of methods for visualizing complex high-dimensional datasets using $k$NN graphs. To find the low-dimensional embedding, these algorithms combine an attractive force between neighboring pairs of points with a…

Machine Learning · Computer Science 2024-06-06 Jan Niklas Böhm , Philipp Berens , Dmitry Kobak

Running machine learning analytics over geographically distributed datasets is a rapidly arising problem in the world of data management policies ensuring privacy and data security. Visualizing high dimensional data using tools such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-13 Viska Wei , Nikita Ivkin , Vladimir Braverman , Alexander Szalay

Dimensionality reduction is often used as an initial step in data exploration, either as preprocessing for classification or regression or for visualization. Most dimensionality reduction techniques to date are unsupervised; they do not…

Machine Learning · Statistics 2020-06-17 Jake S. Rhodes , Adele Cutler , Guy Wolf , Kevin R. Moon

Embedding is a useful technique to project a high-dimensional feature into a low-dimensional space, and it has many successful applications including link prediction, node classification and natural language processing. Current approaches…

Information Retrieval · Computer Science 2020-09-21 Meimei Liu , Hongxia Yang

tSNE and UMAP are popular dimensionality reduction algorithms due to their speed and interpretable low-dimensional embeddings. Despite their popularity, however, little work has been done to study their full span of differences. We…

The recent advancements in computational power and machine learning algorithms have led to vast improvements in manifold areas of research. Especially in finance, the application of machine learning enables both researchers and…

Statistical Finance · Quantitative Finance 2020-05-21 Sven Husmann , Antoniya Shivarova , Rick Steinert

Video annotation is a critical and time-consuming task in computer vision research and applications. This paper presents a novel annotation pipeline that uses pre-extracted features and dimensionality reduction to accelerate the temporal…

Computer Vision and Pattern Recognition · Computer Science 2024-09-18 Alexandru Bobe , Jan C. van Gemert

Graph representations have increasingly grown in popularity during the last years. Existing representation learning approaches explicitly encode network structure. Despite their good performance in downstream processes (e.g., node…

Machine Learning · Computer Science 2018-05-08 Saba A. Al-Sayouri , Ekta Gujral , Danai Koutra , Evangelos E. Papalexakis , Sarah S. Lam

Widely used pipelines for analyzing high-dimensional data utilize two-dimensional visualizations. These are created, for instance, via t-distributed stochastic neighbor embedding (t-SNE). A crucial element of the t-SNE embedding procedure…

Machine Learning · Computer Science 2024-12-06 Martin Skrodzki , Nicolas F. Chaves-de-Plaza , Thomas Höllt , Elmar Eisemann , Klaus Hildebrandt

Low-tubal-rank tensor approximation has been proposed to analyze large-scale and multi-dimensional data. However, finding such an accurate approximation is challenging in the streaming setting, due to the limited computational resources. To…

Machine Learning · Computer Science 2021-08-24 Qianxin Yi , Chenhao Wang , Kaidong Wang , Yao Wang

We introduce an improved unsupervised clustering protocol specially suited for large-scale structured data. The protocol follows three steps: a dimensionality reduction of the data, a density estimation over the low dimensional…

Machine Learning · Computer Science 2019-11-05 Joan Garriga , Frederic Bartumeus

Multivariate time series (MTS) have become increasingly common in healthcare domains where human vital signs and laboratory results are collected for predictive diagnosis. Recently, there have been increasing efforts to visualize healthcare…

Machine Learning · Computer Science 2017-08-29 Minh Nguyen , Sanjay Purushotham , Hien To , Cyrus Shahabi

Selecting the most appropriate data examples to present a deep neural network (DNN) at different stages of training is an unsolved challenge. Though practitioners typically ignore this problem, a non-trivial data scheduling method may…

Machine Learning · Computer Science 2018-07-25 Vithursan Thangarasa , Graham W. Taylor

Contrastive learning, especially self-supervised contrastive learning (SSCL), has achieved great success in extracting powerful features from unlabeled data. In this work, we contribute to the theoretical understanding of SSCL and uncover…

Machine Learning · Computer Science 2023-06-05 Tianyang Hu , Zhili Liu , Fengwei Zhou , Wenjia Wang , Weiran Huang

t-SNE has gained popularity as a dimension reduction technique, especially for visualizing data. It is well-known that all dimension reduction techniques may lose important features of the data. We provide a mathematical framework for…

Machine Learning · Computer Science 2026-04-16 Rupert Li , Elchanan Mossel

Stochastic neighbor embedding (SNE) methods $t$-SNE, UMAP are two most popular dimensionality reduction methods for data visualization. Contrastive learning, especially self-supervised contrastive learning (SSCL), has showed great success…

Machine Learning · Computer Science 2023-09-18 Yi Zhang

This work considers large-data asymptotics for t-distributed stochastic neighbor embedding (tSNE), a widely-used non-linear dimension reduction algorithm. We identify an appropriate continuum limit of the tSNE objective function, which can…

Statistics Theory · Mathematics 2024-10-18 Ryan Murray , Adam Pickarski

We introduce the Collection Space Navigator (CSN), a browser-based visualization tool to explore, research, and curate large collections of visual digital artifacts that are associated with multidimensional data, such as vector embeddings…

Computer Vision and Pattern Recognition · Computer Science 2025-02-14 Tillmann Ohm , Mar Canet Solà , Andres Karjus , Maximilian Schich
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