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We study the phenomenon of cyclic dominance in the paradigmatic Rock--Paper--Scissors model, as occurring in both stochastic individual-based models of finite populations and in the deterministic replicator equations. The mean-field…

Populations and Evolution · Quantitative Biology 2017-08-03 Qian Yang , Tim Rogers , Jonathan H P Dawes

The abundance of a species' population in an ecosystem is rarely stationary, often exhibiting large fluctuations over time. Using historical data on marine species, we show that the year-to-year fluctuations of population growth rate obey a…

Adaptation and Self-Organizing Systems · Physics 2015-06-02 Jie Sun , Sean P. Cornelius , John Janssen , Kimberly A. Gray , Adilson E. Motter

Many models of population dynamics are formulated as deterministic iterated maps although real populations are stochastic. This is justifiable in the limit of large population sizes, as the stochastic fluctuations are negligible then.…

Populations and Evolution · Quantitative Biology 2025-09-16 Snehal M. Shekatkar

In species reproducing both sexually and asexually clones are often more common in recently established populations. Earlier studies have suggested that this pattern arises from natural selection favouring asexual recruitment in young…

Populations and Evolution · Quantitative Biology 2017-12-06 M. Rafajlovic , D. Kleinhans , C. Gulliksson , J. Fries , D. Johansson , A. Ardehed , L. Sundqvist , R. T. Pereyra , B. Mehlig , P. R. Jonsson , K. Johannesson

Coevolving and competing species or game-theoretic strategies exhibit rich and complex dynamics for which a general theoretical framework based on finite populations is still lacking. Recently, an explicit mean-field description in the form…

Statistical Mechanics · Physics 2007-05-23 Arne Traulsen , Jens Christian Claussen , Christoph Hauert

Population diversity plays a key role in evolutionary algorithms that enables global exploration and avoids premature convergence. This is especially more crucial in dynamic optimization in which diversity can ensure that the population…

Neural and Evolutionary Computing · Computer Science 2019-10-15 Maryam Hasani-Shoreh , Frank Neumann

The growth function of populations is central in biomathematics. The main dogma is the existence of density dependence mechanisms, which can be modelled with distinct functional forms that depend on the size of the population. One important…

Populations and Evolution · Quantitative Biology 2010-10-15 Harold P. de Vladar

Selection, mutation and random drift affect the dynamics of allele frequencies and consequently of quantitative traits. While the macroscopic dynamics of quantitative traits can be measured, the underlying allele frequencies are typically…

Populations and Evolution · Quantitative Biology 2016-03-15 Katarína Boďová , Gašper Tkačik , Nicholas H. Barton

Single-cell experiments revealed substantial variability in generation times, growth rates but also in birth and division sizes between genetically identical cells. Understanding how these fluctuations determine the fitness of the…

Populations and Evolution · Quantitative Biology 2025-03-24 Arthur Genthon

Stochastic models of diffusion with excluded-volume effects are used to model many biological and physical systems at a discrete level. The average properties of the population may be described by a continuum model based on partial…

Chemical Physics · Physics 2012-12-20 Maria Bruna , S. Jonathan Chapman

Identifying the critical domain size necessary for a population to persist is an important question in ecology. Both demographic and environmental stochasticity impact a population's ability to persist. Here we explore ways of including…

Populations and Evolution · Quantitative Biology 2016-01-22 Jody R. Reimer , Michael B. Bonsall , Philip K. Maini

The coevolutionary dynamics in finite populations currently is investigated in a wide range of disciplines, as chemical catalysis, biological evolution, social and economic systems. The dynamics of those systems can be formulated within the…

Populations and Evolution · Quantitative Biology 2012-06-12 Jens Christian Claussen

We consider a version of large population games whose players compete for resources using strategies with adaptable preferences. The system efficiency is measured by the variance of the decisions. In the regime where the system can be…

Condensed Matter · Physics 2009-11-10 K. Y. Michael Wong , S. W. Lim , Peixun Luo

This paper addresses mechanisms for boundedly rational decision makers in discrete choice problem. First, we introduce two mathematical models of population dynamics with conformity biases. We next analyze the models in terms of…

Systems and Control · Electrical Eng. & Systems 2021-11-23 Shunya Yamashita , Kodai Irifune , Takeshi Hatanaka , Yasuaki Wasa , Kenji Hirata , Kenko Uchida

This paper intends to understand and to improve the working principle of decomposition-based multi-objective evolutionary algorithms. We review the design of the well-established Moea/d framework to support the smooth integration of…

Neural and Evolutionary Computing · Computer Science 2020-04-16 Geoffrey Pruvost , Bilel Derbel , Arnaud Liefooghe , Ke Li , Qingfu Zhang

Linked beneficial and deleterious mutations are known to decrease the fixation probability of a favorable mutation in large asexual populations. While the hindering effect of strongly deleterious mutations on adaptive evolution has been…

Populations and Evolution · Quantitative Biology 2022-03-22 Kavita Jain

The large deviation principle on phase space is proved for a class of Markov processes known as random population dynamics with catastrophes. In the paper we study the process which corresponds to the random population dynamics with linear…

Probability · Mathematics 2019-11-18 A. Logachov , O. Logachova , A. Yambartsev

We present a general framework to describe the evolutionary dynamics of an arbitrary number of types in finite populations based on stochastic differential equations (SDE). For large, but finite populations this allows to include…

Populations and Evolution · Quantitative Biology 2012-06-13 Arne Traulsen , Jens Christian Claussen , Christoph Hauert

The differential evolution (DE) algorithm suffers from high computational time due to slow nature of evaluation. In contrast, micro-DE (MDE) algorithms employ a very small population size, which can converge faster to a reasonable solution.…

Neural and Evolutionary Computing · Computer Science 2016-09-27 Hojjat Salehinejad , Shahryar Rahnamayan , Hamid R. Tizhoosh

Increasing pressures on the environment are generating an ever-increasing need to manage animal and plant populations sustainably, and to protect and rebuild endangered populations. Effective management requires reliable mathematical…

Methodology · Statistics 2009-09-29 Stephen T. Buckland , Ken B. Newman , Carmen Fernández , Len Thomas , John Harwood