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In a recent paper [arXiv:1506.06649 [nlin.CG]], we presented an example of a 3-state cellular automaton which exhibits behaviour analogous to degenerate hyperbolicity often observed in finite-dimensional dynamical systems. We also…

Cellular Automata and Lattice Gases · Physics 2017-04-04 Henryk Fukś , Joel Midgley-Volpato

This paper is concerned with a compositional approach for constructing finite Markov decision processes of interconnected discrete-time stochastic control systems. The proposed approach leverages the interconnection topology and a notion of…

Systems and Control · Computer Science 2017-12-22 Abolfazl Lavaei , Sadegh Soudjani , Majid Zamani

The paper proposes a simple formalism for dealing with deterministic, non-deterministic and stochastic cellular automata in a unifying and composable manner. Armed with this formalism, we extend the notion of intrinsic simulation between…

Formal Languages and Automata Theory · Computer Science 2012-08-15 Pablo Arrighi , Nicolas Schabanel , Guillaume Theyssier

The paper analyses stochastic systems describing reacting molecular systems with a combination of two types of state spaces, a finite-dimensional, and an infinite dimenional part. As a typical situation consider the interaction of larger…

Biomolecules · Quantitative Biology 2009-09-29 L. Sbano , M. Kirkilionis

Strong coupling between a system and its environment leads to the emergence of non-Markovian dynamics, which cannot be described by a time-local master equation. One way to capture such dynamics is to use numerical real-time path integrals,…

Mesoscale and Nanoscale Physics · Physics 2017-11-29 Aidan Strathearn , Brendon W. Lovett , Peter Kirton

In the infectious disease literature, significant effort has been devoted to studying dynamics at a single scale. For example, compartmental models describing population-level dynamics are often formulated using differential equations. In…

Populations and Evolution · Quantitative Biology 2025-04-16 Yuan Yin , Jennifer A. Flegg , Mark B. Flegg

We propose a novel Galerkin discretization scheme for stochastic optimal control problems on an indefinite time horizon. The control problems are linear-quadratic in the controls, but possibly nonlinear in the state variables, and the…

Optimization and Control · Mathematics 2013-10-01 Ralf Banisch , Carsten Hartmann

The dynamics of dissipative many-body quantum systems sometimes admit an emergent classical description in terms of a Markov chain even though the corresponding state space contains highly entangled states. In particular, a bad-cavity laser…

This paper explicitly details the relation between $M$-matrices, nonnegative roots of nonnegative matrices, and the embedding problem for finite-state stationary Markov chains. The set of nonsingular nonnegative matrices with arbitrary…

Functional Analysis · Mathematics 2022-11-29 Alexander Van-Brunt

How do cellular automata behave in the limit of a very large number of cells? Is there a continuum limit with simple properties? We attack this problem by mapping certain classes of automata to quantum field theories for which powerful…

Cellular Automata and Lattice Gases · Physics 2022-12-08 C. Wetterich

We introduce classical many-body dynamics on a one-dimensional lattice comprising local two-body maps arranged on discrete space-time mesh that serve as discretizations of Hamiltonian dynamics with arbitrarily time-varying coupling…

Statistical Mechanics · Physics 2025-07-23 Žiga Krajnik , Enej Ilievski , Tomaž Prosen , Benjamin J. A. Héry , Vincent Pasquier

Adhesion between cells plays an important role in many biological processes such as tissue morphogenesis and homeostasis, wound healing and cancer cell metastasis. From a mathematical perspective, adhesion between multiple cell types has…

Cell Behavior · Quantitative Biology 2024-04-17 Shahzeb Raja Noureen , Richard L. Mort , Christian A. Yates

We introduce a statistical mechanics formalism for the study of constrained graph evolution as a Markovian stochastic process, in analogy with that available for spin systems, deriving its basic properties and highlighting the role of the…

Disordered Systems and Neural Networks · Physics 2015-05-13 A. C. C. Coolen , A. De Martino , A. Annibale

We consider general Markov chains with discrete time in an arbitrary measurable (phase) space and homogeneous in time. Markov chains are defined by the classical transition function which within the framework of the operator treatment…

Probability · Mathematics 2020-06-17 Alexander I. Zhdanok

We discuss current carrying non-equilibrium steady state of an open fermionic Hubbard chain that is strongly driven by markovian incoherent processes localized at the chain ends. An explicit form of exact many-body density operator for any…

Quantum Physics · Physics 2014-02-03 Tomaz Prosen

Many ion channels spontaneously switch between different levels of activity. Although this behaviour known as modal gating has been observed for a long time it is currently not well understood. Despite the fact that appropriately…

Quantitative Methods · Quantitative Biology 2018-08-14 Ivo Siekmann , Mark Fackrell , Edmund J. Crampin , Peter Taylor

Recently there has been an intense effort to understand measurement induced transitions, but we still lack a good understanding of non-Markovian effects on these phenomena. To that end, we consider two coupled chains of free fermions, one…

Quantum Physics · Physics 2024-03-18 Mikheil Tsitsishvili , Dario Poletti , Marcello Dalmonte , Giuliano Chiriacò

This paper shows how to determine all the unidimensional two-state cellular automaton rules of a given number of inputs which conserve the number of active sites. These rules have to satisfy a necessary and sufficient condition. If the…

adap-org · Physics 2009-10-30 Nino Boccara , Henryk Fuks

Stochastic processes govern the time evolution of a huge variety of realistic systems throughout the sciences. A minimal description of noisy many-particle systems within a Markovian picture and with a notion of spatial dimension is given…

Statistical Mechanics · Physics 2021-02-25 Andrea Pizzi , Andreas Nunnenkamp , Johannes Knolle

Based on a group theoretical setting a sort of discrete dynamical system is constructed and applied to a combinatorial dynamical system defined on the set of certain Bethe ansatz related objects known as the rigged configurations. This…

Exactly Solvable and Integrable Systems · Physics 2010-04-01 Taichiro Takagi
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