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We present a fast and robust alternative method to compute covariance matrix in case of cosmology studies. Our method is based on the jackknife resampling applied on simulation mock catalogues. Using a set of 600 BOSS DR11 mock catalogues…

Cosmology and Nongalactic Astrophysics · Physics 2016-06-02 S. Escoffier , M. -C. Cousinou , A. Tilquin , A. Pisani , A. Aguichine , S. de la Torre , A. Ealet , W. Gillard , E. Jullo

The continuing advances of omic technologies mean that it is now more tangible to measure the numerous features collectively reflecting the molecular properties of a sample. When multiple omic methods are used, statistical and computational…

Genomics · Quantitative Biology 2023-08-14 Tim Downing , Nicos Angelopoulos

In a multiscale modeling approach, we present computer simulation results for a rectifying bipolar nanopore on two modeling levels. In an all-atom model, we use explicit water to simulate ion transport directly with the molecular dynamics…

Mesoscale and Nanoscale Physics · Physics 2018-03-13 Zoltán Ható , Mónika Valiskó , Tamás Kristóf , Dirk Gillespie , Dezső Boda

We use the photon flux and absorption tracer algorithm presented in Katz et al.~2018, to characterise the contribution of haloes of different mass and stars of different age and metallicity to the reionization of the Universe. We employ a…

Cosmology and Nongalactic Astrophysics · Physics 2018-12-05 Harley Katz , Taysun Kimm , Martin G. Haehnelt , Debora Sijacki , Joakim Rosdahl , Jeremy Blaizot

Understanding astrophysical and cosmological processes can be challenging due to their complexity and lack of intuitive analogies. To address this, we present \texttt{AstronomyCalc}, a Python package specifically designed to aid…

Physics Education · Physics 2025-11-26 Sambit K. Giri

We present a code to generate mock observations of 21 cm intensity mapping experiments. The emphasis of the code is on reducing the computational cost of running a full-blown simulation, trading computational time for accuracy. The code can…

Cosmology and Nongalactic Astrophysics · Physics 2015-06-19 David Alonso , Pedro G. Ferreira , Mario G. Santos

The recombination clumping factor, $C$, is a key parameter in modeling cosmic reionization, but its value is sensitive to the definition of the Intergalactic Medium (IGM). We investigate the clumping factor using the GAMER adaptive mesh…

Cosmology and Nongalactic Astrophysics · Physics 2025-11-13 Yuri Oku , Renyue Cen

We study the effect of a prolonged epoch of reionization on the angular power spectrum of the Cosmic Microwave Background. Typically reionization studies assume a sudden phase transition, with the intergalactic gas moving from a fully…

Astrophysics · Physics 2009-11-07 Marialuce Bruscoli , Andrea Ferrara , Evan Scannapieco

Despite the accelerating presence of exploratory causal analysis in modern science and medicine, the available non-experimental methods for validating causal models are not well characterized. One of the most popular methods is to evaluate…

Methodology · Statistics 2025-03-20 Ritwick Banerjee , Bryan Andrews , Erich Kummerfeld

We present a formalism for coupling a density functional theory-based quantum simulation to a classical simulation for the treatment of simple metallic systems. The formalism is applicable to multiscale simulations in which the part of the…

Materials Science · Physics 2009-11-10 Nicholas Choly , Gang Lu , Weinan E , Efthimios Kaxiras

Cosmic Reionization imprints its signature on the temperature and polarization anisotropies of the cosmic microwave background (CMB). Advances in CMB telescopes have already placed a significant constraint on the history of reionization. As…

Cosmology and Nongalactic Astrophysics · Physics 2022-05-18 Hina Sakamoto , Kyungjin Ahn , Kiyotomo Ichiki , Hyunjin Moon , Kenji Hasegawa

In recent years, simulation methods based on the scaling of atomic potential functions, such as quasi-coarse-grained dynamics and coarse-grained dynamics, have shown promising results for modeling crystalline systems at multiple scales.…

Mesoscale and Nanoscale Physics · Physics 2024-09-11 Dong-Dong Jiang , Jian-Li Shao

We propose the fast semi-analytical method of modelling the polarization curves in the voltammetric experiment. The method is based on usage of the special func- tions and shows a big calculation speed and a high accuracy and stability. Low…

Computational Physics · Physics 2016-08-12 N. A. Koshev , A. N. Koshev , V. V. Kuzina

Moment optimization techniques have been recently proposed to solve globally various classes of optimal control problems. As those methods return truncated moment sequences of occupation measures, this paper explores a numeric method for…

Optimization and Control · Mathematics 2014-04-17 Mathieu Claeys

The analysis of complex multiphysics astrophysical simulations presents a unique and rapidly growing set of challenges: reproducibility, parallelization, and vast increases in data size and complexity chief among them. In order to meet…

Instrumentation and Methods for Astrophysics · Physics 2015-05-20 Matthew J. Turk , Britton D. Smith , Jeffrey S. Oishi , Stephen Skory , Samuel W. Skillman , Tom Abel , Michael L. Norman

With the temperature power spectrum of the cosmic microwave background (CMB) at least four orders of magnitude larger than the B-mode polarisation power spectrum, any instrumental imperfections that couple temperature to polarisation must…

Cosmology and Nongalactic Astrophysics · Physics 2017-02-22 Christopher G. R. Wallis , A. Bonaldi , Michael L. Brown , Richard A. Battye

Cosmological probes pose an inverse problem where the measurement result is obtained through observations, and the objective is to infer values of model parameters which characterize the underlying physical system -- our Universe. Modern…

Instrumentation and Methods for Astrophysics · Physics 2019-05-21 Timur Takhtaganov , Zarija Lukic , Juliane Mueller , Dmitriy Morozov

We utilize the dynamical renormalization group formalism to calculate the real space trajectory of a compact binary inspiral for long times via a systematic resummation of secularly growing terms. This method generates closed form solutions…

General Relativity and Quantum Cosmology · Physics 2017-06-07 Chad R. Galley , Ira Z. Rothstein

We present and analyze a series of synthetic galaxy survey fields based on the IllustrisTNG Simulation suite. With the Illustris public data release and JupyterLab service, we generated a set of twelve lightcone catalogs covering areas from…

Astrophysics of Galaxies · Physics 2022-11-30 Gregory F. Snyder , Theodore Pena , L. Y. Aaron Yung , Caitlin Rose , Jeyhan Kartaltepe , Harry Ferguson

AIMS: The separation of foreground contamination from cosmic microwave background (CMB) observations is one of the most challenging and important problem of digital signal processing in Cosmology. In literature, various techniques have been…

Astrophysics · Physics 2015-05-13 R. Vio , P. Andreani