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In the present work, we study the properties of biological networks by applying analogous notions of fundamental concepts in Riemannian geometry and optimal mass transport to discrete networks described by weighted graphs. Specifically, we…

Molecular Networks · Quantitative Biology 2017-12-11 Maryam Pouryahya , James Mathews , Allen Tannenbaum

Graphs can model real-world, complex systems by representing entities and their interactions in terms of nodes and edges. To better exploit the graph structure, graph neural networks have been developed, which learn entity and edge…

Machine Learning · Computer Science 2022-06-06 Tong Liu , Yushan Liu , Marcel Hildebrandt , Mitchell Joblin , Hang Li , Volker Tresp

Let $N$ be a closed enlargeable manifold in the sense of Gromov-Lawson and $M$ a closed spin manifold of equal dimension, a famous theorem of Gromov-Lawson states that the connected sum $M\# N$ admits no metric of positive scalar curvature.…

Differential Geometry · Mathematics 2017-05-25 Guangxiang Su , Weiping Zhang

A spanning tree of a network or graph is a subgraph that connects all nodes with the least number or weight of edges. The spanning tree is one of the most straightforward techniques for network simplification and sampling, and for…

Social and Information Networks · Computer Science 2025-12-03 Lovro Šubelj

Graphs can represent relational information among entities and graph structures are widely used in many intelligent tasks such as search, recommendation, and question answering. However, most of the graph-structured data in practice suffers…

Information Retrieval · Computer Science 2021-12-30 Hanxiong Chen , Yunqi Li , Shaoyun Shi , Shuchang Liu , He Zhu , Yongfeng Zhang

Graph Neural Networks achieve remarkable results on problems with structured data but come as black-box predictors. Transferring existing explanation techniques, such as occlusion, fails as even removing a single node or edge can lead to…

Machine Learning · Computer Science 2020-10-27 Lukas Faber , Amin K. Moghaddam , Roger Wattenhofer

How does one generalize differential geometric constructs such as curvature of a manifold to the discrete world of graphs and other combinatorial structures? This problem carries significant importance for analyzing models of discrete…

Combinatorics · Mathematics 2023-06-27 J. F. Du Plessis , Xerxes D. Arsiwalla

We examine data-processing of Markov chains through the lens of information geometry. We first establish a theory of congruent Markov morphisms within the framework of stochastic matrices. Specifically, we introduce and justify the concept…

Probability · Mathematics 2023-12-21 Geoffrey Wolfer , Shun Watanabe

Convolutional networks are ubiquitous in deep learning. They are particularly useful for images, as they reduce the number of parameters, reduce training time, and increase accuracy. However, as a model of the brain they are seriously…

Machine Learning · Computer Science 2022-01-19 Roman Pogodin , Yash Mehta , Timothy P. Lillicrap , Peter E. Latham

Building upon [1], this study aims to introduce fractal geometry into graph theory, and to establish a potential theoretical foundation for complex networks. Specifically, we employ the method of substitution to create and explore…

Dynamical Systems · Mathematics 2024-05-29 Nero Ziyu Li

A construction is proposed for linear connections on non-commutative algebras. The construction relies on a generalisation of the Leibnitz rules of commutative geometry and uses the bimodule structure of $\Omega^1$. A special role is played…

High Energy Physics - Theory · Physics 2010-04-06 J. Mourad

In this paper we study the inverse eigenvector centrality problem on directed graphs: given a prescribed node centrality profile, we seek edge weights that realize it. Since this inverse problem generally admits infinitely many solutions,…

Social and Information Networks · Computer Science 2026-02-13 Mauro Passacantando , Fabio Raciti

Much information about a graph can be obtained by studying its spanning trees. On the other hand, a graph can be regarded as a 1-dimensional cell complex, raising the question of developing a theory of trees in higher dimension. As observed…

Combinatorics · Mathematics 2015-06-24 Art M. Duval , Caroline J. Klivans , Jeremy L. Martin

Network or graph structures are ubiquitous in the study of complex systems. Often, we are interested in complexity trends of these system as it evolves under some dynamic. An example might be looking at the complexity of a food web as…

Information Theory · Computer Science 2007-07-16 Russell K. Standish

The highly non-linear nature of deep neural networks causes them to be susceptible to adversarial examples and have unstable gradients which hinders interpretability. However, existing methods to solve these issues, such as adversarial…

Machine Learning · Computer Science 2023-01-11 Suraj Srinivas , Kyle Matoba , Himabindu Lakkaraju , Francois Fleuret

A graphical model is a statistical model that is associated to a graph whose nodes correspond to variables of interest. The edges of the graph reflect allowed conditional dependencies among the variables. Graphical models admit…

Methodology · Statistics 2016-06-09 Mathias Drton , Marloes H. Maathuis

We address the problem of efficiently gathering correlated data from a wired or a wireless sensor network, with the aim of designing algorithms with provable optimality guarantees, and understanding how close we can get to the known…

Networking and Internet Architecture · Computer Science 2009-08-03 Jian Li , Amol Deshpande , Samir Khuller

We define notions of local topological convergence and local geometric convergence for embedded graphs in $\mathbb{R}^n,$ and study their properties. The former is related to Benjamini-Schramm convergence, and the latter to weak convergence…

Probability · Mathematics 2017-06-28 Benjamin Schweinhart

Data describing the three-dimensional structure of physical networks is increasingly available, leading to a surge of interest in network science to explore the relationship between the shape and connectivity of physical networks. We…

Physics and Society · Physics 2024-08-20 Luka Blagojević , Márton Pósfai

In an increasingly interconnected world, understanding and summarizing the structure of these networks becomes increasingly relevant. However, this task is nontrivial; proposed summary statistics are as diverse as the networks they…

Statistics Theory · Mathematics 2020-04-15 Lee M. Gunderson , Gecia Bravo-Hermsdorff