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The chiral structure of liquid crystalline phases arises due to the intrinsic chirality of the constituent mesogens. While it is seemingly straightforward to quantify the macroscopic chirality by using, for instance, the cholesteric pitch…

Soft Condensed Matter · Physics 2007-05-23 Randall D. Kamien

Accurate interaction potentials between microscopic components such as colloidal particles or cells are crucial to understanding a range of processes, including colloidal crystallization, bacterial colony formation, and cancer metastasis.…

We propose a new theoretical method for the calculation of the interaction energy between macromolecular systems at large distances. The method provides a linear scaling of the computing time with the system size and is considered as an…

Biological Physics · Physics 2009-11-13 Ilia A. Solov'yov , Alexander V. Yakubovich , Andrey V. Solov'yov , Walter Greiner

We explore the interplay between tunneling process and chiral interactions in the discrimination of chiral states for an ensemble of molecules in a biological environment. Each molecule is described by an asymmetric double-well potential…

Biomolecules · Quantitative Biology 2017-04-28 Arash Tirandaz , Farhad Taher Ghahramani , Afshin Shafiee

In this paper I propose a new model for representing the formation energies of multicomponent crystalline alloys as a function of atom types. In the cases when displacements of atoms from their equilibrium positions are not large, the…

Computational Physics · Physics 2017-08-02 Alexander Shapeev

The microscopic structure of several amorphous substances often reveals complex patterns such as medium- or long-range order, spatial heterogeneity, and even local polycrystallinity. To capture all these features, models usually incorporate…

The presence of chirality in the main molecules of life may well be not just a structural artifact, but of pure biological advantage. The possibility of the existence of a phenomenon of a special mode of interaction, labeled as "chiral…

Biological Physics · Physics 2007-05-23 G. Gilat

We study the effective chiral interaction between molecules arising from quantum dispersion interactions within a model in which a) the dominant excited states of a molecule form a band whose width is small compared to the average…

Soft Condensed Matter · Physics 2007-05-23 A. S. Issaenko , A. B. Harris , T. C. Lubensky

We investigate the formation of polycrystalline structures in a class of particle systems. The atomistic energy is modeled as a sum of particle energies that favor atoms being locally isometric to a reference lattice. The discrete frame…

Mesoscale and Nanoscale Physics · Physics 2026-04-22 Leonard Kreutz , Timo Ziereis

Plasmonic chirality exhibits great potential for novel nanooptical devices due to the generation of a strong chiroptical response. Previous reports on plasmonic chirality explanations are mainly based on phase retardation and coupling. We…

Mesoscale and Nanoscale Physics · Physics 2016-05-05 Li Hu , Yingzhou Huang , Yurui Fang

We introduce a simple spherical model whose structural properties are similar to the ones generated by models with directional interactions, by employing a binary mixture of large and small hard spheres, with a square-well attraction acting…

Disordered Systems and Neural Networks · Physics 2009-11-13 Emanuela Zaccarelli , Francesco Sciortino , Piero Tartaglia

The representation of the potential energy surfaces of atom molecule or molecular dimers interactions should account faithfully for the symmetry properties of the systems, preserving at the same time a compact analytical form. To this aim,…

Structure, function and dynamics of many biomolecular systems can be characterized by the energetic variational principle and the corresponding systems of partial differential equations (PDEs). This principle allows us to focus on the…

Numerical Analysis · Mathematics 2016-11-03 Guo-Wei Wei , Y. C. Zhou

Using ensembles of two, three and four spheres immersed in a fermionic background we evaluate the (integrated) density of states and the Casimir energy. We thus infer that for sufficiently smooth objects, whose various geometric…

Nuclear Theory · Physics 2007-05-23 Aurel Bulgac , Andreas Wirzba

Many biological systems fold thin sheets of lipid membrane into complex three-dimensional structures. This microscopic origami is often mediated by the adsorption and self-assembly of proteins on a membrane. As a model system to study…

Soft Condensed Matter · Physics 2016-10-11 Raphael Sarfati , Eric R. Dufresne

In this paper we consider the problem of characterizing the minimum energy configurations of a finite system of particles interacting between them due to attracting or repulsive forces given by a certain inter molecular potential. We limit…

Mathematical Physics · Physics 2016-03-08 Pablo V. Negrón-Marrero , Melissa López-Serrano

A method for computing the thermopower in interacting systems is proposed. This approach, which relies on Monte Carlo simulations, is illustrated first for a diatomic chain of hard-point elastically colliding particles and then in the case…

Statistical Mechanics · Physics 2015-10-01 Shunda Chen , Jiao Wang , Giulio Casati , Giuliano Benenti

The van der Waals dispersion interaction between two chiral molecules in the presence of arbirary magnetoelectric media is derived using perturbation theory. To be general, the molecular polarisabilities are assumed to be of electric,…

Quantum Physics · Physics 2020-06-24 Hassan Safari , Pablo Barcellona , Stefan Yoshi Buhmann , Akbar Salam

We discuss a class of models for particulate gels in which the particle contacts are described by an effective interaction combining a two-body attraction and a three-body angular repulsion. Using molecular dynamics, we show how varying the…

Soft Condensed Matter · Physics 2021-08-05 Minaspi Bantawa , Wayan A. Fontaine-Seiler , Peter D. Olmsted , Emanuela Del Gado

We analyze the pattern formation in systems of active particles with chiral forces in the context of pedestrian dynamics. To describe the interparticle interactions, we use the standard social force model and supplement it with a new type…

Statistical Mechanics · Physics 2024-04-30 Anna S. Bodrova , Fatema Al Najim , N. V. Brilliantov
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