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One of the major goals of nanobionics and bottom-up synthetic biology is the development of artificial cell organelles for the creation of cell-like structures operating similar to biological systems with a minimalistic set of building…

Subcellular Processes · Quantitative Biology 2019-11-18 Günther Knör

Recent work has suggested enhancing Bloom filters by using a pre-filter, based on applying machine learning to model the data set the Bloom filter is meant to represent. Here we model such learned Bloom filters, clarifying what guarantees…

Data Structures and Algorithms · Computer Science 2018-02-06 Michael Mitzenmacher

Computational multiscale modeling encompasses a wide range of end-products and a great number of technological applications. This paper provides an overview of the computational multiscale modeling approach based on the utilization of MBN…

Computational Physics · Physics 2021-07-23 Alexey V. Verkhovtsev , Ilia A. Solov'yov , Andrey V. Solov'yov

Engineering the photonic density of states (PDOS) using resonant microcavities or periodic dielectric media gives control over a plethora of classical and quantum phenomena associated with light. Here, we show that nanostructured…

Optics · Physics 2012-05-04 Zubin Jacob , Igor Smolyaninov , Evgenii Narimanov

This contribution is devoted to the comparison of various resampling approaches that have been proposed in the literature on particle filtering. It is first shown using simple arguments that the so-called residual and stratified methods do…

Computational Engineering, Finance, and Science · Computer Science 2016-08-16 Randal Douc , Olivier Cappé , Eric Moulines

A continuous route from a disordered soup of simple chemical feedstocks to a functional protocell -- a compartment that metabolizes, grows, and propagates -- remains elusive. Here, we show that a homogeneous aqueous chemical mixture…

Soft Condensed Matter · Physics 2026-01-28 Nayan Chakraborty , Shashi Thutupalli

The emergence of membranous compartments (protocells) with encapsulated genetic material was a crucial step life's origin and evolution. The hot spring hypothesis for the origin of life suggests that protocells could have formed in hot…

Dielectric properties of material mixtures are of importance in diagnostics, characterization and design of systems in various engineering fields. In this Letter, we propose a peculiar dielectric mixture expression, which is based on the…

Materials Science · Physics 2007-05-23 Enis Tuncer

Computer-aided design for synthetic biology promises to accelerate the rational and robust engineering of biological systems; it requires both detailed and quantitative mathematical and experimental models of the processes to (re)design,…

Photogalvanic solar cells, the original dye based solar cell, have yet to fulfill their promise as a low fabrication cost, scalable energy conversion system. The efficient performance of photogalvanic cells relies on high dye solubility and…

Chemical Physics · Physics 2014-09-16 Mohammad Ali Mahmoudzadeh , John D. W. Madden

Systems engineering has developed a mature knowledge on how to design, integrate and manage complex industrial systems, whereas disciplines studying complex systems in nature or society also propose numerous tools for their understanding.…

Computers and Society · Computer Science 2018-05-28 Juste Raimbault

High-throughput synthesis of solution-processable structurally variable small-molecule semiconductors is both an opportunity and a challenge. A large number of diverse molecules provide a possibility for quick material discovery and machine…

We discuss the key principles of artificial photosynthesis for photovoltaic energy conversion. We demonstrate these principles by examining the operation of the so-called "dye sensitized solar cell" (DSSC) - a photoelectrochemical device…

Soft Condensed Matter · Physics 2007-05-23 P. Meredith , B. J. Powell , J. Riesz , R. Vogel , D. Blake , I. Kartini , G. Will , S. Subianto

This review summarizes recent progress in investigating polymer systems by using Differential dynamic microscopy (DDM), a rapidly emerging approach that transforms a commercial microscope by combining real-space information with the…

Soft Condensed Matter · Physics 2021-06-07 Roberto Cerbino , Fabio Giavazzi , Matthew E. Helgeson

Like other types of computational research, modeling and simulation of biological processes (biomodels) is still largely communicated without sufficient detail to allow independent reproduction of results. But reproducibility in this area…

Other Quantitative Biology · Quantitative Biology 2023-04-19 Pedro Mendes

Scientists perform diverse manual procedures that are tedious and laborious. Such procedures are considered a bottleneck for modern experimental science, as they consume time and increase burdens in fields including material science and…

An adequate control of cell response in tissue engineering applications is of utmost importance to obtain products suitable to clinical practice. This paper is the first part of a series of two connected publications in which we study via…

Tissues and Organs · Quantitative Biology 2015-12-08 Chiara Lelli , Riccardo Sacco , Paola Causin , Manuela T. Raimondi

In the modern world, technology is at its peak. Different avenues in programming and technology have been explored for data analysis, automation, and robotics. Machine learning is key to optimize data analysis, make accurate predictions,…

Subcellular Processes · Quantitative Biology 2023-10-18 Akshay Bhalla , Suraj Rajendran

Single-cell technologies are revolutionizing the entire field of biology. The large volumes of data generated by single-cell technologies are high-dimensional, sparse, heterogeneous, and have complicated dependency structures, making…

Some characterizations of mixed renewal processes in terms of exchangeability and of different types of disintegrations are given. As a consequence, an existence result for mixed renewal processes, providing also a new construction for…

Probability · Mathematics 2014-07-01 D. P. Lyberopoulos , N. D. Macheras