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Related papers: Analysis Traceability and Provenance for HEP

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Julia is a mature general-purpose programming language, with a large ecosystem of libraries and more than 12000 third-party packages, which specifically targets scientific computing. As a language, Julia is as dynamic, interactive, and…

Provenance metadata can be valuable in data sharing settings, where it can be used to help data consumers form judgements regarding the reliability of the data produced by third parties. However, some parts of provenance may be sensitive,…

Databases · Computer Science 2014-06-10 Paolo Missier , Jeremy Bryans , Carl Gamble , Vasa Curcin , Roxana Danger

Interpretability of deep learning is widely used to evaluate the reliability of medical imaging models and reduce the risks of inaccurate patient recommendations. For models exceeding human performance, e.g. predicting RNA structure from…

Quantitative Methods · Quantitative Biology 2022-08-31 Mara Graziani , Niccolò Marini , Nicolas Deutschmann , Nikita Janakarajan , Henning Müller , María Rodríguez Martínez

HEP Cluster is designed and implemented in Scientific Linux Cern 5.5 to grant High Energy Physics researchers one place where they can go to undertake a particular task or to provide a parallel processing architecture in which CPU resources…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-10-30 Vivek Chalotra , Anju Bhasin , Anik Gupta , Sanjeev Singh Sambyal

Feedforward neural networks are widely used in autonomous systems, particularly for control and perception tasks within the system loop. However, their vulnerability to adversarial attacks necessitates formal verification before deployment…

Optimization and Control · Mathematics 2025-09-03 Yuhao Zhang , Xiangru Xu

One of the foundations of science is that researchers must publish the methodology used to achieve their results so that others can attempt to reproduce them. This has the added benefit of allowing methods to be adopted and adapted for…

Databases · Computer Science 2014-06-05 Paolo Missier , Simon Woodman , Hugo Hiden , Paul Watson

Many real-world planning domains involve diverse information sources, external entities, and variable-reliability agents, all of which may impact the confidence, risk, and sensitivity of plans. Humans reviewing a plan may lack context about…

Artificial Intelligence · Computer Science 2020-11-04 Scott E. Friedman , Robert P. Goldman , Richard G. Freedman , Ugur Kuter , Christopher Geib , Jeffrey Rye

The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged…

Computers and Society · Computer Science 2018-09-27 Russell A. Poldrack , Krzysztof J. Gorgolewski , Gael Varoquaux

The operation of instruments and detectors in laboratory or beamline environments presents a complex challenge, requiring stable operation of multiple concurrent devices, often controlled by separate hardware and software solutions. These…

We provide an overview of tools enabling users to utilize data from open sources for decision-making support in weakly-structured subject domains. Presently, it is impossible to replace expert data with data from open sources in the process…

Databases · Computer Science 2019-11-14 Vitaliy Tsyganok , Sergii Kadenko , Oleh Andriichuk

Nowadays, software artifacts are ubiquitous in our lives being an essential part of home appliances, cars, cell phones, and even in more critical activities like aeronautics and health sciences. In this context software failures may produce…

Software Engineering · Computer Science 2014-01-07 Manuel Giménez , Mariano M. Moscato , Carlos G. Lopez Pombo , Marcelo F. Frias

Research processes often rely on high-performance computing (HPC), but HPC is often seen as antithetical to "reproducibility": one would have to choose between software that achieves high performance, and software that can be deployed in a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-16 Ludovic Courtès

Scientific research demands reproducibility and transparency, particularly in data-intensive fields like electrophysiology. Electrophysiology data is typically analyzed using scripts that generate output files, including figures. Handling…

Neurons and Cognition · Quantitative Biology 2024-06-21 Cristiano André Köhler , Danylo Ulianych , Sonja Grün , Stefan Decker , Michael Denker

Provenance is information recording the source, derivation, or history of some information. Provenance tracking has been studied in a variety of settings; however, although many design points have been explored, the mathematical or semantic…

Databases · Computer Science 2009-12-22 James Cheney , Amal Ahmed , Umut Acar

Provenance information are essential for the traceability of scientific studies or experiments and thus crucial for ensuring the credibility and reproducibility of research findings. This paper discusses a comprehensive provenance framework…

Databases · Computer Science 2025-04-16 Tanja Auge , Sascha Genehr , Meike Klettke and , Frank Krüger , Max Schröder

We introduce provenance networks, a novel class of neural models designed to provide end-to-end, training-data-driven explainability. Unlike conventional post-hoc methods, provenance networks learn to link each prediction directly to its…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Ali Kayyam , Anusha Madan Gopal , M. Anthony Lewis

Recently, the computational neuroscience community has pushed for more transparent and reproducible methods across the field. In the interest of unifying the domain of auditory neuroscience, naplib-python provides an intuitive and general…

Neurons and Cognition · Quantitative Biology 2023-09-20 Gavin Mischler , Vinay Raghavan , Menoua Keshishian , Nima Mesgarani

This report introduces Juno, a modular Python package for optical design and simulation. Juno consists of a complete library that includes a graphical user interface to design and visualise arbitrary optical elements, set up wave…

Instrumentation and Detectors · Physics 2022-12-27 David Dierickx , Patrick Cleeve , Sergey Gorelick , James C. Whisstock , Alex De Marco

This paper explores the integration of provenance tracking systems within the context of Semantic Web technologies to enhance data integrity in diverse operational environments. SURROUND Australia Pty Ltd demonstrates innovative…

Cryptography and Security · Computer Science 2025-01-17 Nilesh Jain