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Distance-based hierarchical clustering (HC) methods are widely used in unsupervised data analysis but few authors take account of uncertainty in the distance data. We incorporate a statistical model of the uncertainty through corruption or…

Machine Learning · Statistics 2016-09-02 Dekang Zhu , Dan P. Guralnik , Xuezhi Wang , Xiang Li , Bill Moran

We present a new way to summarize and select mixture models via the hierarchical clustering tree (dendrogram) constructed from an overfitted latent mixing measure. Our proposed method bridges agglomerative hierarchical clustering and…

Methodology · Statistics 2024-03-11 Dat Do , Linh Do , Scott A. McKinley , Jonathan Terhorst , XuanLong Nguyen

Identifying possible clusters in datasets and estimating their overall modularity are central tasks in pattern recognition. In the present work, concepts and methodologies are described for performing these tasks while considering only the…

Physics and Society · Physics 2026-05-27 Alexandre Benatti , Luciano da F. Costa

Hierarchical graph clustering is a common technique to reveal the multi-scale structure of complex networks. We propose a novel metric for assessing the quality of a hierarchical clustering. This metric reflects the ability to reconstruct…

Social and Information Networks · Computer Science 2018-07-16 Thomas Bonald , Bertrand Charpentier

Identifying meaningful structure across multiple scales remains a central challenge in network science. We introduce Hierarchical Clustering Entropy (HCE), a general and model-agnostic framework for detecting informative levels in…

Social and Information Networks · Computer Science 2025-08-07 Jorge Martinez Armas

We propose methods for the analysis of hierarchical clustering that fully use the multi-resolution structure provided by a dendrogram. Specifically, we propose a loss for choosing between clustering methods, a feature importance score and a…

Methodology · Statistics 2023-01-31 Luben M. C. Cabezas , Rafael Izbicki , Rafael B. Stern

Single-linkage clustering is a popular form of hierarchical agglomerative clustering (HAC) where the distance between two clusters is defined as the minimum distance between any pair of points across the two clusters. In single-linkage HAC,…

Data Structures and Algorithms · Computer Science 2025-06-24 Quinten De Man , Laxman Dhulipala , Kishen N Gowda

Computing a Single-Linkage Dendrogram (SLD) is a key step in the classic single-linkage hierarchical clustering algorithm. Given an input edge-weighted tree $T$, the SLD of $T$ is a binary dendrogram that summarizes the $n-1$ clusterings…

Data Structures and Algorithms · Computer Science 2024-05-14 Laxman Dhulipala , Xiaojun Dong , Kishen N Gowda , Yan Gu

One of the main challenges for hierarchical clustering is how to appropriately identify the representative points in the lower level of the cluster tree, which are going to be utilized as the roots in the higher level of the cluster tree…

Machine Learning · Statistics 2021-11-16 Wen-Bo Xie , Zhen Liu , Jaideep Srivastava

Complex systems are usually represented as an intricate set of relations between their components forming a complex graph or network. The understanding of their functioning and emergent properties are strongly related to their structural…

Data Analysis, Statistics and Probability · Physics 2014-01-08 Sergio Gomez , Alberto Fernandez , Clara Granell , Alex Arenas

Hierarchical clustering is a popular method for identifying distinct groups in a dataset. The most commonly used method for pruning a dendrogram is via a single horizontal cut. In this paper, we propose a new technique "weakest link optimal…

Methodology · Statistics 2023-01-20 Jiacheng Ge , Robert Tibshirani

We propose unsupervised representation learning and feature extraction from dendrograms. The commonly used Minimax distance measures correspond to building a dendrogram with single linkage criterion, with defining specific forms of a level…

Machine Learning · Computer Science 2023-01-02 Morteza Haghir Chehreghani , Mostafa Haghir Chehreghani

Agglomerative hierarchical clustering is one of the most widely used approaches for exploring how observations in a dataset relate to each other. However, its greedy nature makes it highly sensitive to small perturbations in the data, often…

Methodology · Statistics 2026-03-17 Di Wu , Jacob Bien , Snigdha Panigrahi

We uncover that current objective-based Divisive Hierarchical Clustering (DHC) methods produce a dendrogram that does not have three desired properties i.e., no unwarranted splitting, group similar clusters into a same subset, ground-truth…

Machine Learning · Computer Science 2026-01-28 Kaifeng Zhang , Kai Ming Ting , Tianrun Liang , Qiuran Zhao

We address the problem of computing a single linkage dendrogram. A possible approach is to: (i) Form an edge weighted graph $G$ over the data, with edge weights reflecting dissimilarities. (ii) Calculate the MST $T$ of $G$. (iii) Break the…

Data Structures and Algorithms · Computer Science 2019-11-04 Huanbiao Zhu , Werner Stuetzle

"mdendro" is an R package that provides a comprehensive collection of linkage methods for agglomerative hierarchical clustering on a matrix of proximity data (distances or similarities), returning a multifurcated dendrogram or…

Information Retrieval · Computer Science 2025-09-16 Alberto Fernández , Sergio Gómez

Comparison-based learning addresses the problem of learning when, instead of explicit features or pairwise similarities, one only has access to comparisons of the form: \emph{Object $A$ is more similar to $B$ than to $C$.} Recently, it has…

Machine Learning · Computer Science 2023-04-04 Aishik Mandal , Michaël Perrot , Debarghya Ghoshdastidar

The paper tackles the problem of clustering multiple networks, directed or not, that do not share the same set of vertices, into groups of networks with similar topology. A statistical model-based approach based on a finite mixture of…

Statistics Theory · Mathematics 2023-11-07 Tabea Rebafka

Hierarchical clustering is a class of algorithms that seeks to build a hierarchy of clusters. It has been the dominant approach to constructing embedded classification schemes since it outputs dendrograms, which capture the hierarchical…

Machine Learning · Statistics 2018-08-28 Xiaofei Ma , Satya Dhavala

Bagging and boosting are proved to be the best methods of building multiple classifiers in classification combination problems. In the area of "flat clustering" problems, it is also recognized that multi-clustering methods based on boosting…

Machine Learning · Computer Science 2018-05-31 Elaheh Rashedi , Abdolreza Mirzaei
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