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The plasmodium of the slime mould Physarum polycephalum has recently received significant attention for its value as a highly malleable amorphous computing substrate. In laboratory-based experiments, micro- and nanoscale artificial circuit…

Emerging Technologies · Computer Science 2013-11-19 Richard Mayne , Andrew Adamatzky

Physarum Polycephalum is a slime mold that is apparently able to solve shortest path problems. A mathematical model has been proposed by biologists to describe the feedback mechanism used by the slime mold to adapt its tubular channels…

Data Structures and Algorithms · Computer Science 2019-07-01 Vincenzo Bonifaci , Kurt Mehlhorn , Girish Varma

How do non-neural organisms, such as the slime mould \textit{Physarum polycephalum}, anticipate periodic events in their environment? We present a minimal, biologically inspired reservoir model that demonstrates simple temporal anticipation…

Neurons and Cognition · Quantitative Biology 2025-05-06 Polyphony Bruna , Linnéa Gyllingberg

Physarum polycephalum is a large single amoeba cell, which in its plasmodial phase,forages and connects nearby food sources with protoplasmic tubes. The organism forages for food by growing these tubes towards detected food stuffs, this…

Emerging Technologies · Computer Science 2014-06-10 James G. H. Whiting , Ben P. J. de Lacy Costello , Andrew Adamatzky

Acellular slime mould Physarum polycephalum is a popular now user-friendly living substrate for designing of future and emergent sensing and computing devices. P. polycephalum exhibits regular patterns of oscillations of its surface…

Emerging Technologies · Computer Science 2013-12-17 Andrew Adamatzky

The slime mould Physarum polycephalum is a suitable candidate organism for soft-matter robotics because it exhibits controllable transport, movement and guidance behaviour. Physarum may be considered as a smart computing and actuating…

Adaptation and Self-Organizing Systems · Physics 2012-12-05 Soichiro Tsuda , Jeff Jones , Andrew Adamatzky

The slime mould Physarum polycephalum displays adaptive transport dynamics and network formation that have inspired its use as a model of biological computation. We develop a Lagrangian formulation of Physarum's adaptive dynamics on…

Neurons and Cognition · Quantitative Biology 2025-11-12 Ricard Solé , Jordi Pla-Mauri

Plasmodium of Physarum polycephalum is a single cell visible by unaided eye. During its foraging behaviour the cell spans spatially distributed sources of nutrients with a protoplasmic network. Geometrical structure of the protoplasmic…

Pattern Formation and Solitons · Physics 2015-05-14 Andrew Adamatzky , Jeff Jones

Decision-making is the process of selecting an action among alternatives, allowing biological and artificial systems to navigate complex environments and optimize behavior. While neural systems rely on neuron-based sensory processing and…

Biological Physics · Physics 2025-06-17 Lisa Schick , Emily Eichenlaub , Fabian Drexel , Alexander Mayer , Siyu Chen , Marcus Roper , Karen Alim

Plasmodium of Physarum polycephalum is a single cell visible by unaided eye, which spans sources of nutrients with its protoplasmic network. In a very simple experimental setup we recorded electric potential of the propagating plasmodium.…

Pattern Formation and Solitons · Physics 2011-07-18 Andrew Adamatzky , Jeff Jones

Plasmodium of Physarum polycephalum is a large cell, visible by unaided eye, which exhibits sophisticated patterns of foraging behaviour. The plasmodium's behaviour is well interpreted in terms of computation, where data are spatially…

Pattern Formation and Solitons · Physics 2012-06-25 Andrew Adamatzky

Could simple organisms such as slime mould approximate LI without recourse to neural tissue? We describe a model whereby LI can emerge without explicit inhibitory wiring, using only bulk transport effects. We use a multi-agent model of…

Emerging Technologies · Computer Science 2015-11-19 Jeff Jones

During the last years, a well studied biological substrate, namely Physarum polycephalum, has been proven efficient on finding appropriate and efficient solutions in hard to solve complex mathematical problems. The plasmodium of P.…

Computing a polygon defining a set of planar points is a classical problem of modern computational geometry. In laboratory experiments we demonstrate that a concave hull, a connected alpha-shape without holes, of a finite planar set is…

Emerging Technologies · Computer Science 2012-06-26 Andrew Adamatzky

Active fluid transport is a hallmark of many biological transport networks. While animal circulatory systems generally rely on a single heart to drive flows, other organisms employ decentralized local pumps to distribute fluids and…

Biological Physics · Physics 2024-01-04 Adam B. Dionne , Katharine E. Jensen , Henrik Ronellenfitsch

Using a Multi-agent systems paradigm, the present project develops, validates and exploits a computational $\textit{testbed}$ that simulates micro-biological complex systems, namely the aggregation patterns of the social amoeba…

Cell Behavior · Quantitative Biology 2021-01-28 Daniele Proverbio , Luca Gallo , Barbara Passalacqua , Jacopo Pellegrino , Marco Maggiora

Plasmodium of \emph{Physarum polycephalum} is a single cell visible by unaided eye. On a non-nutrient substrate the plasmodium propagates as a traveling localization, as a compact wave-fragment of protoplasm. The plasmodium-localization…

Pattern Formation and Solitons · Physics 2012-08-14 Andrew Adamatzky

Plasmodium of Physarum polycephalum is a large single cell visible by unaided eye. It shows sophisticated behavioural traits in foraging for nutrients and developing an optimal transport network of protoplasmic tubes spanning sources of…

Emerging Technologies · Computer Science 2013-05-03 Andrew Adamatzky , Genaro J. Martinez

Plasmodium of acellular slime mould Physarum polycephalum exhibits traits of wave-like behaviour. The plasmodium's behaviour can be finely tuned in laboratory experiments by using herbal tablets. A single tablet acts as a fixed attractor:…

Pattern Formation and Solitons · Physics 2012-12-13 Andrew Adamatzky

Bacteria are perhaps the simplest living systems capable of complex behaviour involving sensing and coherent, collective behaviour an example of which is the phenomena of swarming on agar surfaces. Two fundamental questions in bacterial…