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The network density matrix formalism allows for describing the dynamics of information on top of complex structures and it has been successfully used to analyze from system's robustness to perturbations to coarse graining multilayer…

Physics and Society · Physics 2023-05-03 Arsham Ghavasieh , Manlio De Domenico

In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell…

Soft Condensed Matter · Physics 2017-11-01 Michael Czajkowski , Dapeng Bi , M. Lisa Manning , M. Cristina Marchetti

It is well known that the rotation number of a circle homeomorphism defined by H. Poincar\'e allows to completely understand the dynamics of such a map from the topological point of view. In this paper, we collect some results concerning…

Dynamical Systems · Mathematics 2013-02-28 Pablo Dávalos

We study planar "vertex" models, which are probability measures on edge subsets of a planar graph, satisfying certain constraints at each vertex, examples including dimer model, and 1-2 model, which we will define. We express the local…

Mathematical Physics · Physics 2012-04-10 Zhongyang Li

We study a one-dimensional system of strongly correlated bosons on a dynamical lattice. To this end, we extend the standard Bose-Hubbard Hamiltonian to include extra degrees of freedom on the bonds of the lattice. We show that this minimal…

We study the transport and localization properties of scalar vibrations on a lattice with random bond strength by means of the transfer matrix method. This model has been recently suggested as a means to investigate the vibrations and heat…

Disordered Systems and Neural Networks · Physics 2007-05-23 Omri Gat , Zeev Olami

Modeling dynamical systems plays a crucial role in capturing and understanding complex physical phenomena. When physical models are not sufficiently accurate or hardly describable by analytical formulas, one can use generic function…

Machine Learning · Computer Science 2021-06-23 Armand Jordana , Justin Carpentier , Ludovic Righetti

A new class of exclusion type processes acting in continuum with synchronous updating is introduced and studied. Ergodic averages of particle velocities are obtained and their connections to other statistical quantities, in particular to…

Dynamical Systems · Mathematics 2015-05-13 Michael Blank

Effective information analysis generally boils down to properly identifying the structure or geometry of the data, which is often represented by a graph. In some applications, this structure may be partly determined by design constraints or…

Machine Learning · Computer Science 2016-11-07 Dorina Thanou , Xiaowen Dong , Daniel Kressner , Pascal Frossard

We introduce a novel generative formulation of deep probabilistic models implementing "soft" constraints on their function dynamics. In particular, we develop a flexible methodological framework where the modeled functions and derivatives…

Machine Learning · Statistics 2018-06-19 Marco Lorenzi , Maurizio Filippone

A procedure to characterize chaotic dynamical systems with concepts of complex networks is pursued, in which a dynamical system is mapped onto a network. The nodes represent the regions of space visited by the system, while edges represent…

Statistical Mechanics · Physics 2011-12-20 Ernesto P. Borges , Daniel O. Cajueiro , Roberto F. S. Andrade

Transport of molecular motors along protein filaments in a half-closed geometry is a common feature of biologically relevant processes in cellular protrusions. Using a lattice gas model we study how the interplay between active and…

Biological Physics · Physics 2017-03-30 Isabella R. Graf , Erwin Frey

This paper introduces some tools from graph theory and distributed consensus algorithms to construct an optimal, yet robust, hierarchical information sharing structure for large-scale decision making and control problems. The proposed…

Systems and Control · Computer Science 2012-08-16 Amir Noori

We study a class of homeomorphisms of surfaces collectively known as linked-twist maps. We introduce an abstract definition which enables us to give a precise characterisation of a property observed by other authors, namely that such maps…

Dynamical Systems · Mathematics 2008-12-05 James Springham

Dynamic networks are structured interconnections of dynamical systems (modules) driven by external excitation and disturbance signals. In order to identify their dynamical properties and/or their topology consistently from measured data, we…

Systems and Control · Computer Science 2018-04-12 Harm H. M. Weerts , Paul M. J. Van den Hof , Arne G. Dankers

We study a model ecosystem by means of dynamical techniques from disordered systems theory. The model describes a set of species subject to competitive interactions through a background of resources, which they feed upon. Additionally…

Populations and Evolution · Quantitative Biology 2009-11-13 Yoshimi Yoshino , Tobias Galla , Kei Tokita

Many transport processes in nature take place on substrates, often considered as unidimensional lanes. These unidimensional substrates are typically non-static: affected by a fluctuating environment, they can undergo conformational changes.…

Statistical Mechanics · Physics 2013-01-11 Francesco Turci , Andrea Parmeggiani , Estelle Pitard , M. Carmen Romano , Luca Ciandrini

Revealing hidden geometry and topology in noisy data sets is a challenging task. Elastic principal graph is a computationally efficient and flexible data approximator based on embedding a graph into the data space and minimizing the energy…

Data Structures and Algorithms · Computer Science 2019-09-25 A. N. Gorban , E. M. Mirkes , A. Zinovyev

In this paper, we introduce a data-driven modeling approach for dynamics problems with latent variables. The state-space of the proposed model includes artificial latent variables, in addition to observed variables that can be fitted to a…

Optimization and Control · Mathematics 2024-06-19 Yushuang Luo , Xiantao Li , Wenrui Hao

In graph-theoretical terms, an edge in a graph connects two vertices while a hyperedge of a hypergraph connects any more than one vertices. If the hypergraph's hyperedges further connect the same number of vertices, it is said to be…

Systems and Control · Electrical Eng. & Systems 2024-11-05 Shaoxuan Cui , Guofeng Zhang , Hildeberto Jardón-Kojakhmetov , Ming Cao
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