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The Luria-Delbr\"uck model is a classic model of population dynamics with random mutations, that has been used historically to prove that random mutations drive evolution. In typical scenarios, the relevant mutation rate is exceedingly…

Biological Physics · Physics 2024-02-22 Deng Pan , Jie Lin , Ariel Amir

The Luria-Delbr{\"u}ck experiment is a cornerstone of evolutionary theory, demonstrating the randomness of mutations before selection. The distribution of the number of mutants in this experiment has been the subject of intense…

Biological Physics · Physics 2015-07-20 Bahram Houchmandzadeh

Microbial populations adapt to their environment by acquiring advantageous mutations, but in the early twentieth century, questions about how these organisms acquire mutations arose. The experiment of Salvador Luria and Max Delbr\"uck that…

Populations and Evolution · Quantitative Biology 2021-06-24 Stephen Montgomery-Smith , Hesam Oveys

We present an explicit solution to a classic model of cell-population growth introduced by Luria and Delbrueck 70 years ago to study the emergence of mutations in bacterial populations. In this model a wild-type population is assumed to…

Probability · Mathematics 2015-06-23 Peter Keller , Tibor Antal

One of the most popular models for quantitatively understanding the emergence of drug resistance both in bacterial colonies and in malignant tumors was introduced long ago by Luria and Delbr\"uck. Here, individual resistant mutants emerge…

Populations and Evolution · Quantitative Biology 2014-04-10 David A. Kessler , Herbert Levine

The Luria-Delbr\"uck distribution is a classical model of mutations in cell kinetics. It is obtained as a limit when the probability of mutation tends to zero and the number of divisions to infinity. It can be interpreted as a compound…

Applications · Statistics 2013-09-11 Agnès Hamon , Bernard Ycart

First, we revisit the stochastic Luria-Delbr\"uck model: a classic two-type branching process which describes cell proliferation and mutation. We prove limit theorems and exact results for the mutation times, clone sizes, and number of…

Probability · Mathematics 2018-09-05 David Cheek , Tibor Antal

The Luria--Delbr\"uck mutation model is a cornerstone of evolution theory and has been mathematically formulated in a number of ways. In this paper we illustrate how this model of mutation rates can be derived by means of classical…

Populations and Evolution · Quantitative Biology 2022-12-02 Lorenzo Pareschi , Giuseppe Toscani

Deterministically growing (wild-type) populations which seed stochastically developing mutant clones have found an expanding number of applications from microbial populations to cancer. The special case of exponential wild-type population…

Populations and Evolution · Quantitative Biology 2016-10-27 Michael D. Nicholson , Tibor Antal

The classical Luria-Delbr\"uck model for fluctuation analysis is extended to the case where cells can either divide or die at the end of their generation time. This leads to a family of probability distributions generalizing the…

Populations and Evolution · Quantitative Biology 2013-05-30 Bernard Ycart

The estimation of mutation probabilities and relative fitnesses in fluctuation analysis is based on the unrealistic hypothesis that the single-cell times to division are exponentially distributed. Using the classical Luria-Delbr\"{u}ck…

Quantitative Methods · Quantitative Biology 2014-03-05 Bernard Ycart

Biological tools such as genetic lineage tracing, three dimensional confocal microscopy and next generation DNA sequencing are providing new ways to quantify the distribution of clones of normal and mutated cells. Population-wide clone size…

Quantitative Methods · Quantitative Biology 2013-11-25 Roshan A , Jones PH , Greenman CD

We discuss the evaluation of Luria-Delbrueck fluctuation experiments under Bellman-Harris models of cell proliferation. It is shown that under certain very natural assumptions concerning the life-time distributions and the offspring…

Probability · Mathematics 2007-05-23 Wolfgang P. Angerer

We investigate a partial differential equation model of a cancer cell population, which is structured with respect to age and telomere length of cells. We assume a continuous telomere length structure, which is applicable to the clonal…

Analysis of PDEs · Mathematics 2019-03-06 József Z. Farkas , Glenn F. Webb

The spread of a particular trait in a cell population often is modelled by an appropriate system of ordinary differential equations describing how the sizes of subpopulations of the cells with the same genome change in time. On the other…

Dynamical Systems · Mathematics 2016-05-26 J. Banasiak , A. Falkiewicz

Stem cells have the potential to produce lineages of non-stem cell populations (differentiated cells) via a ubiquitous hierarchal division scheme. Differentiation of a stem cell into (partially) differentiated cells can happen either…

Cell Behavior · Quantitative Biology 2014-11-07 Kamran Kaveh , Mohammad Kohandel , Siv Sivaloganathan

Mutations can arise from the chance misincorporation of nucleotides during DNA replication or from DNA lesions that are not repaired correctly. We introduce a model that relates the source of mutations to their accumulation with cell…

Populations and Evolution · Quantitative Biology 2015-07-27 Ziyue Gao , Minyoung J. Wyman , Guy Sella , Molly Przeworski

Mutation-induced drug resistance in cancer often causes the failure of therapies and cancer recurrence, despite an initial tumor reduction. The timing of such cancer recurrence is governed by a balance between several factors such as…

Probability · Mathematics 2013-07-22 Jasmine Foo , Kevin Leder

We re-examined data from the classic Luria-Delbruck fluctuation experiment, which is often credited with establishing a Darwinian basis for evolution. We argue that, for the Lamarckian model of evolution to be ruled out by the experiment,…

Populations and Evolution · Quantitative Biology 2017-09-13 Caroline Holmes , Mahan Ghafari , Abbas Anzar , Varun Saravanan , Ilya Nemenman

Some populations, such as red blood cells (RBCs), exhibit a pattern of population decline that is closer to linear rather than exponential, which has proven to be unexpectedly challenging to describe with a single simple mathematical model.…

Populations and Evolution · Quantitative Biology 2020-04-14 Irina Kareva , Georgy Karev
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