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Reproducibility is one of the core dimensions that concur to deliver Trustworthy Artificial Intelligence. Broadly speaking, reproducibility can be defined as the possibility to reproduce the same or a similar experiment or method, thereby…

Artificial Intelligence · Computer Science 2023-02-27 Riccardo Albertoni , Sara Colantonio , Piotr Skrzypczyński , Jerzy Stefanowski

DNA sequencing is becoming increasingly commonplace, both in medical and direct-to-consumer settings. To promote discovery, collected genomic data is often de-identified and shared, either in public repositories, such as OpenSNP, or with…

Machine Learning · Computer Science 2022-12-21 Rajagopal Venkatesaramani , Bradley A. Malin , Yevgeniy Vorobeychik

Software is omnipresent within all factors of society. It is thus important to ensure that software are well tested to mitigate bad user experiences as well as the potential for severe financial and human losses. Software testing is however…

Software Engineering · Computer Science 2025-04-30 Jason Wang , Basem Suleiman , Muhammad Johan Alibasa

We are entering the era of ubiquitous genetic information for research, clinical care, and personal curiosity. Sharing these datasets is vital for rapid progress in understanding the genetic basis of human diseases. However, one growing…

Genomics · Quantitative Biology 2013-10-14 Yaniv Erlich , Arvind Narayanan

Large collections of high-dimensional data have become nearly ubiquitous across many academic fields and application domains, ranging from biology to the humanities. Since working directly with high-dimensional data poses challenges, the…

The recent interest in Big Data has generated a broad range of new academic, corporate, and policy practices along with an evolving debate amongst its proponents, detractors, and skeptics. While the practices draw on a common set of tools,…

Computing is an indispensable component of nearly all technologies and is ubiquitous for vast segments of society. It is also essential to discoveries and innovations in most disciplines. However, while past grand challenges in science have…

Computers and Society · Computer Science 2026-01-05 William Regli , Rajmohan Rajaraman , Daniel Lopresti , David Jensen , Mary Lou Maher , Manish Parashar , Mona Singh , Holly Yanco

We explore the main characteristics of big brain network data that offer unique statistical challenges. The brain networks are biologically expected to be both sparse and hierarchical. Such unique characterizations put specific topological…

Neurons and Cognition · Quantitative Biology 2017-12-27 Moo K. Chung

Achieving complete reproducibility in science, particularly in research fields such as biodiversity, is challenging due to analytical choices, bias and interpretation. Here, we examine examples of reproducibility in biological systematics,…

Other Quantitative Biology · Quantitative Biology 2025-08-01 Charles Morphy D. Santos , Luciana Campos Paulino , Michaella P. Andrade , Gabriel Tognella-Poccia , João Paulo Gois

As large-scale social data explode and machine-learning methods evolve, scholars of entrepreneurship and innovation face new research opportunities but also unique challenges. This chapter discusses the difficulties of leveraging…

General Economics · Economics 2025-05-14 Ningzi Li , Shiyang Lai , James Evans

We are surrounded by huge amounts of large-scale high dimensional data. It is desirable to reduce the dimensionality of data for many learning tasks due to the curse of dimensionality. Feature selection has shown its effectiveness in many…

Machine Learning · Computer Science 2016-11-08 Jundong Li , Huan Liu

Big data are data on a massive scale in terms of volume, intensity, and complexity that exceed the capacity of standard software tools. They present opportunities as well as challenges to statisticians. The role of computational…

Computation · Statistics 2018-06-13 Chun Wang , Ming-Hui Chen , Elizabeth Schifano , Jing Wu , Jun Yan

Modern DNA sequencing technologies enable geneticists to rapidly identify genetic variation among many human genomes. However, isolating the minority of variants underlying disease remains an important, yet formidable challenge for medical…

Genomics · Quantitative Biology 2015-06-15 Uma Paila , Brad Chapman , Rory Kirchner , Aaron Quinlan

Software Testing is a well-established area in software engineering, encompassing various techniques and methodologies to ensure the quality and reliability of software systems. However, with the advent of generative artificial intelligence…

Software Engineering · Computer Science 2023-09-18 Aldeida Aleti

Computational biology continues to spread into new fields, becoming more accessible to researchers trained in the wet lab who are eager to take advantage of growing datasets, falling costs, and novel assays that present new opportunities…

Other Quantitative Biology · Quantitative Biology 2024-01-09 Richard J. Abdill , Emma Talarico , Laura Grieneisen

Generative AI is rapidly transforming medical imaging and text analysis, offering immense potential for enhanced diagnosis and personalized care. However, this transformative technology raises crucial ethical, societal, and legal questions.…

Computer Vision and Pattern Recognition · Computer Science 2024-06-18 Onyekachukwu R. Okonji , Kamol Yunusov , Bonnie Gordon

Since the arrival of next-generation sequencing technologies the amount of genetic sequencing data has increased dramatically. This has has fueled an increase in human genetics research. At the same time, with the recent advent of…

Genomics · Quantitative Biology 2016-07-04 Kristiina Ausmees , Pushpam Aji John

Recently, we have been witnessing huge advancements in the scale of data we routinely generate and collect in pretty much everything we do, as well as our ability to exploit modern technologies to process, analyze and understand this data.…

Databases · Computer Science 2017-09-25 Radwa Elshawi , Sherif Sakr

The new age of digital growth has marked all fields. This technological evolution has impacted data flows which have witnessed a rapid expansion over the last decade that makes the data traditional processing unable to catch up with the…

Databases · Computer Science 2024-04-22 Rania Mkhinini Gahar , Olfa Arfaoui , Minyar Sassi Hidri

Open data is an emerging paradigm to share large and diverse datasets -- primarily from governmental agencies, but also from other organizations -- with the goal to enable the exploitation of the data for societal, academic, and commercial…

Software Engineering · Computer Science 2012-02-09 Holger M. Kienle